School of Applied Biosciences, Kyungpook National University, Daegu, 41566, Republic of Korea.
School of Food Science and Biotechnology, Kyungpook National University, Daegu, 41566, Republic of Korea.
J Microbiol. 2017 Nov;55(11):856-861. doi: 10.1007/s12275-017-7255-0. Epub 2017 Oct 27.
A Gram-staining-negative, non-motile, curved rod-shaped, aerobic bacterium, designated S1-2-4, was isolated from soil in Jeollabuk-do province, Republic of Korea, and was characterized taxonomically using a polyphasic approach. Comparative 16S rRNA gene sequence analysis showed that strain S1-2-4 was a member of the family Cytophagaceae and most closely related to 'Spirosoma radiotolerans' DG5A (97.2%), Spirosoma fluviale MSd3 (96.4%), and Spirosoma linguale DSM 74 (96.3%). The genomic DNA G + C content of strain S1-2-4 was 49.7 mol%. The major fatty acids were summed feature 3 (C ω7c/C ω6c), C ω5c, and C, and the major polar lipid was phosphatidylethanolamine. MK-7 was the predominant respiratory quinone. Phenotypic and chemotaxonomic data supported the affiliation of strain S1-2-4 with the genus Spirosoma. DNA-DNA hybridization between strain S1-2-4 and 'Spirosoma radiotolerans' showed relatively low DNA-DNA relatedness (31%). Strain S1-2-4 could be distinguished from its closest phylogenetic neighbors based on its phenotypic, genotypic, and chemotaxonomic features. Therefore, strain S1-2-4 represents a novel member of the genus Spirosoma, for which the name Spirosoma lituiforme sp. nov. is proposed. The type strain is S1-2-4 (= KCTC 52724 = JCM 32128).
一株革兰氏阴性、非运动、弯曲杆状、需氧细菌,被命名为 S1-2-4,从韩国全罗北道的土壤中分离得到,并通过多相分类学方法进行了分类学表征。比较 16S rRNA 基因序列分析表明,菌株 S1-2-4 是噬细胞科的成员,与“Spirosoma radiotolerans”DG5A(97.2%)、Spirosoma fluviale MSd3(96.4%)和 Spirosoma linguale DSM 74(96.3%)最为密切相关。菌株 S1-2-4 的基因组 DNA G+C 含量为 49.7mol%。主要脂肪酸为 sum feature 3(C ω7c/C ω6c)、C ω5c 和 C,主要极性脂为磷脂酰乙醇胺。MK-7 是主要的呼吸醌。表型和化学分类学数据支持菌株 S1-2-4 与 Spirosoma 属的归属。菌株 S1-2-4 与“Spirosoma radiotolerans”之间的 DNA-DNA 杂交显示相对较低的 DNA-DNA 相关性(31%)。菌株 S1-2-4 可以根据其表型、基因型和化学分类特征与最接近的系统发育邻居区分开来。因此,菌株 S1-2-4 代表 Spirosoma 属的一个新成员,建议将其命名为 Spirosoma lituiforme sp. nov.。模式菌株为 S1-2-4(=KCTC 52724=JCM 32128)。