School of Applied Biosciences, Kyungpook National University, Daegu, 41566, Republic of Korea.
Department of Bio and Environmental Technology, Seoul Women's University, Seoul, 01797, Republic of Korea.
Curr Microbiol. 2021 Jun;78(6):2447-2454. doi: 10.1007/s00284-021-02495-9. Epub 2021 Apr 28.
A bacterial strain, SD-g, was isolated from a soil sample collected on Dokdo Island, South Korea. Cells were observed to be Gram stain negative and short rod shaped, and colonies to be pink in color. Growth of the isolate was observed at 4-30 °C, pH 6-8, and in the presence of 0-2.0% NaCl. Analysis of 16S rRNA gene sequences identified strain SD-g as a member of the genus Mucilaginibacter in the family Sphingobacteriaceae, with high levels of sequence similarity with Mucilaginibacter terrenus ZH6 (96.9%), Mucilaginibacter lutimaris BR-3 (96.8%), Mucilaginibacter carri PR0008K (96.8%), Mucilaginibacter gilvus F01003 (96.7%), Mucilaginibacter litoreus BR-18 (96.6%), and Mucilaginibacter terrigena 17JY9-4 (96.5%). The genomic DNA G+C content of strain SD-g was calculated to be 40.6 mol%. The predominant respiratory quinone of the isolate was found to be MK-7; the main polar lipid was phosphatidylethanolamine; and the major fatty acids were identified as summed feature 3 (C ω7c/C ω6c; 29.0%), C iso (19.1%), C iso (28.1%), C (14.9%), and C iso 3-OH (7.4%). The digital DNA-DNA hybridization (dDDH) and average nucleotide identity (ANI) values between strain SD-g and M. terrenus ZH6, M. gilvus F01003, and M. terrigena ranged from 17.7 to 18.4% and 72.1 to 74.0%, respectively. On the basis of its phenotypic properties, genotypic distinctiveness, and chemotaxonomic features, strain SD-g represents a novel species in the genus Mucilaginibacter, for which the name Mucilaginibacter segetis sp. nov. is proposed. The type strain is SD-g (= KCTC 82353 = JCM 34284).
一株细菌菌株 SD-g 从韩国独岛采集的土壤样本中分离得到。细胞革兰氏染色阴性,短杆状,菌落呈粉红色。该分离株在 4-30°C、pH6-8 和 0-2.0%NaCl 存在的情况下生长。16S rRNA 基因序列分析表明,SD-g 菌株是鞘氨醇杆菌科粘质沙雷氏菌属的成员,与粘质沙雷氏菌 ZH6(96.9%)、粘质沙雷氏菌 lutimaris BR-3(96.8%)、粘质沙雷氏菌 carri PR0008K(96.8%)、粘质沙雷氏菌 gilvus F01003(96.7%)、粘质沙雷氏菌 litoreus BR-18(96.6%)和粘质沙雷氏菌 terrigena 17JY9-4(96.5%)的序列相似性较高。SD-g 菌株的基因组 DNA G+C 含量计算为 40.6mol%。该分离株的主要呼吸醌为 MK-7;主要极性脂为磷脂酰乙醇胺;主要脂肪酸为 summed feature 3(C ω7c/C ω6c;29.0%)、C iso(19.1%)、C iso(28.1%)、C(14.9%)和 C iso 3-OH(7.4%)。SD-g 菌株与粘质沙雷氏菌 ZH6、粘质沙雷氏菌 F01003 和粘质沙雷氏菌 terrigena 的数字 DNA-DNA 杂交(dDDH)和平均核苷酸同一性(ANI)值分别为 17.7-18.4%和 72.1-74.0%。基于其表型特性、基因型独特性和化学生物特征,SD-g 菌株代表粘质沙雷氏菌属中的一个新种,拟命名为沙雷氏菌 segetis 种。模式菌株为 SD-g(=KCTC 82353=JCM 34284)。