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Bioinformatics. 2018 Sep 1;34(17):3028-3029. doi: 10.1093/bioinformatics/bty212.
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Microb Genom. 2015 Sep 14;1(3):e000029. doi: 10.1099/mgen.0.000029. eCollection 2015 Sep.
3
Investigation of a national outbreak of STEC Escherichia coli O157 using online consumer panel control methods: Great Britain, October 2014.利用在线消费者小组控制方法对英国2014年10月大肠杆菌O157全国性疫情的调查
Epidemiol Infect. 2017 Apr;145(5):864-871. doi: 10.1017/S0950268816003009. Epub 2016 Dec 14.
4
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J Food Prot. 2016 Jul;79(7):1161-8. doi: 10.4315/0362-028X.JFP-15-580.
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Whole genome sequencing improved case ascertainment in an outbreak of Shiga toxin-producing Escherichia coli O157 associated with raw drinking milk.全基因组测序改善了一起与生饮牛奶相关的产志贺毒素大肠杆菌O157疫情的病例确诊情况。
Epidemiol Infect. 2016 Oct;144(13):2812-23. doi: 10.1017/S0950268816000509. Epub 2016 Mar 10.
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An outbreak of Shiga toxin-producing Escherichia coli serogroup O157 linked to a lamb-feeding event.一起与一次羔羊喂养活动相关的产志贺毒素大肠杆菌O157血清型暴发。
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FoodChain-Lab: A Trace-Back and Trace-Forward Tool Developed and Applied during Food-Borne Disease Outbreak Investigations in Germany and Europe.食物链实验室:一种在德国和欧洲食源性疾病暴发调查期间开发并应用的溯源与追踪工具。
PLoS One. 2016 Mar 17;11(3):e0151977. doi: 10.1371/journal.pone.0151977. eCollection 2016.
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Shiga Toxin-Producing Escherichia coli O157, England and Wales, 1983-2012.产志贺毒素大肠杆菌O157,英格兰和威尔士,1983 - 2012年
Emerg Infect Dis. 2016 Apr;22(4):590-7. doi: 10.3201/eid2204.151485.
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A large Great Britain-wide outbreak of STEC O157 phage type 8 linked to handling of raw leeks and potatoes.在英国范围内爆发的一起大规模与处理生韭菜和土豆有关的产志贺毒素大肠杆菌O157噬菌体8型疫情。
Epidemiol Infect. 2016 Jan;144(1):171-81. doi: 10.1017/S0950268815001016. Epub 2015 Jun 4.
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Rapid and Easy In Silico Serotyping of Escherichia coli Isolates by Use of Whole-Genome Sequencing Data.利用全基因组测序数据对大肠杆菌分离株进行快速简便的电子血清分型
J Clin Microbiol. 2015 Aug;53(8):2410-26. doi: 10.1128/JCM.00008-15. Epub 2015 May 13.

一起与受污染的沙拉菜有关的产志贺毒素大肠杆菌 O157:H7 暴发:流行病学、基因组学和食品追溯调查。

An outbreak of Shiga toxin-producing Escherichia coli O157:H7 associated with contaminated salad leaves: epidemiological, genomic and food trace back investigations.

机构信息

National Infection Service,Public Health England,London,UK.

Field Epidemiology Services,Public Health England,London,UK.

出版信息

Epidemiol Infect. 2018 Jan;146(2):187-196. doi: 10.1017/S0950268817002874. Epub 2017 Dec 17.

DOI:10.1017/S0950268817002874
PMID:29248018
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9134740/
Abstract

In August 2015, Public Health England detected an outbreak of Shiga toxin-producing Escherichia coli (STEC) serotype O157:H7 caused by contaminated salad leaves in a mixed leaf prepacked salad product from a national retailer. The implicated leaves were cultivated at five different farms and the zoonotic source of the outbreak strain was not determined. In March 2016, additional isolates from new cases were identified that shared a recent common ancestor with the outbreak strain. A case-case study involving the cases identified in 2016 revealed that ovine exposures were associated with illness (n = 16; AOR 8·24; 95% CI 1·55-39·74). By mapping the recent movement of sheep and lambs across the United Kingdom, epidemiological links were established between the cases reporting ovine exposures. Given the close phylogenetic relationship between the outbreak strain and the isolates from cases with ovine exposures, it is plausible that ovine faeces may have contaminated the salad leaves via untreated irrigation water or run-off from fields nearby. Timely and targeted veterinary and environmental sampling should be considered during foodborne outbreaks of STEC, particularly where ready to eat vegetables and salads are implicated.

摘要

2015 年 8 月,英国公共卫生部检测到一起由全国零售商销售的混合叶预包装沙拉产品中受污染的沙拉叶引起的产志贺毒素大肠杆菌(STEC)血清型 O157:H7 疫情。受污染的叶子来自五个不同的农场,疫情菌株的动物源尚未确定。2016 年 3 月,从新发病例中鉴定出更多与疫情菌株具有近期共同祖先的分离株。对 2016 年确定的病例进行病例对照研究显示,绵羊接触与发病相关(n = 16;AOR 8.24;95%CI 1.55-39.74)。通过对英国境内绵羊和羔羊的近期活动进行映射,报告绵羊接触的病例之间建立了流行病学联系。鉴于疫情菌株与有绵羊接触的病例分离株之间存在密切的系统发育关系,绵羊粪便可能通过未经处理的灌溉用水或附近田地的径流污染了沙拉叶。在食源性病原体引起的 STEC 爆发期间,特别是当涉及即食蔬菜和沙拉时,应考虑及时和有针对性的兽医和环境采样。