Zhou Weilong, Liu Lu, Feng Yu, Zong Zhiyong
Center of Infectious Diseases, West China Hospital, Sichuan University, Chengdu, China.
Division of Infectious Diseases, State Key Laboratory of Biotherapy, Chengdu, China.
Front Microbiol. 2018 Jan 22;9:11. doi: 10.3389/fmicb.2018.00011. eCollection 2018.
A clinical strain, named SCKP83, was isolated and found to be resistant to colistin thanks to the presence plasmid-borne colistin resistant gene . The strain was subjected to whole genome sequencing and conjugation experiments. The subsequent analysis indicated that the strain belongs to ST15 and the capsular type K41. In SCKP83, was carried by a 97.4-kb non-self-transmissible plasmid, a 90.9-kb region of which was predicted as an intact phage. This phage was 47.79% GC content, encoded 105 proteins and contained three tRNAs. was located downstream of two copies of the insertion sequence IS (one complete and one truncated) and was inserted in the gene, which encodes a putative antirepressor for antagonizing C1 repression, in this phage. The phage is highly similar to phage P7 (77% coverage and 98% identity) from . Several similar -carrying plasmids have been found in at various locations in China, suggesting that these phage-like plasmids have circulated in China. The findings in this study suggest that the P7 phage-like plasmids are not restricted to and may represent new vehicles to mediate the inter-species spread of .
一株名为SCKP83的临床菌株被分离出来,由于存在质粒携带的黏菌素抗性基因,该菌株对黏菌素具有抗性。对该菌株进行了全基因组测序和接合实验。后续分析表明,该菌株属于ST15型,荚膜类型为K41。在SCKP83中,由一个97.4 kb的非自我传递质粒携带,其中90.9 kb的区域被预测为一个完整的噬菌体。该噬菌体的GC含量为47.79%,编码105种蛋白质,并包含三个tRNA。位于插入序列IS的两个拷贝(一个完整,一个截短)的下游,并插入到该噬菌体中编码假定的抗阻遏物以拮抗C1阻遏的基因中。该噬菌体与来自的噬菌体P7高度相似(覆盖率77%,同一性98%)。在中国各地的中发现了几种类似的携带质粒,这表明这些噬菌体样质粒在中国已经传播。本研究的结果表明,P7噬菌体样质粒并不局限于,可能代表介导种间传播的新载体。