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运用最佳实践方法预测繁殖鸟类的生物多样性。

Forecasting biodiversity in breeding birds using best practices.

作者信息

Harris David J, Taylor Shawn D, White Ethan P

机构信息

Department of Wildlife Ecology and Conservation, University of Florida, Gainesville, FL, United States of America.

School of Natural Resources and Environment, University of Florida, Gainesville, FL, United States of America.

出版信息

PeerJ. 2018 Feb 8;6:e4278. doi: 10.7717/peerj.4278. eCollection 2018.

DOI:10.7717/peerj.4278
PMID:29441230
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5808145/
Abstract

Biodiversity forecasts are important for conservation, management, and evaluating how well current models characterize natural systems. While the number of forecasts for biodiversity is increasing, there is little information available on how well these forecasts work. Most biodiversity forecasts are not evaluated to determine how well they predict future diversity, fail to account for uncertainty, and do not use time-series data that captures the actual dynamics being studied. We addressed these limitations by using best practices to explore our ability to forecast the species richness of breeding birds in North America. We used hindcasting to evaluate six different modeling approaches for predicting richness. Hindcasts for each method were evaluated annually for a decade at 1,237 sites distributed throughout the continental United States. All models explained more than 50% of the variance in richness, but none of them consistently outperformed a baseline model that predicted constant richness at each site. The best practices implemented in this study directly influenced the forecasts and evaluations. Stacked species distribution models and "naive" forecasts produced poor estimates of uncertainty and accounting for this resulted in these models dropping in the relative performance compared to other models. Accounting for observer effects improved model performance overall, but also changed the rank ordering of models because it did not improve the accuracy of the "naive" model. Considering the forecast horizon revealed that the prediction accuracy decreased across all models as the time horizon of the forecast increased. To facilitate the rapid improvement of biodiversity forecasts, we emphasize the value of specific best practices in making forecasts and evaluating forecasting methods.

摘要

生物多样性预测对于保护、管理以及评估当前模型对自然系统的刻画程度至关重要。虽然生物多样性预测的数量在增加,但关于这些预测效果如何的可用信息却很少。大多数生物多样性预测并未经过评估以确定它们对未来多样性的预测能力,没有考虑不确定性,也未使用能够捕捉所研究实际动态的时间序列数据。我们通过采用最佳实践来探讨预测北美繁殖鸟类物种丰富度的能力,从而解决了这些局限性。我们使用后向预测来评估六种不同的预测丰富度的建模方法。在分布于美国大陆的1237个地点,对每种方法的后向预测进行了为期十年的年度评估。所有模型都解释了丰富度方差的50%以上,但没有一个模型始终优于预测每个地点丰富度恒定的基线模型。本研究中实施的最佳实践直接影响了预测和评估。堆叠物种分布模型和“朴素”预测对不确定性的估计较差,考虑到这一点导致这些模型在相对性能上相较于其他模型下降。考虑观测者效应总体上提高了模型性能,但也改变了模型的排名顺序,因为它没有提高“朴素”模型的准确性。考虑预测范围表明,随着预测时间范围的增加,所有模型的预测准确性都会下降。为了促进生物多样性预测的快速改进,我们强调在进行预测和评估预测方法时特定最佳实践的价值。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e5d/5808145/4128075749c8/peerj-06-4278-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e5d/5808145/7183a646de1f/peerj-06-4278-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e5d/5808145/fe55c8f7d773/peerj-06-4278-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e5d/5808145/b65fb93da3e6/peerj-06-4278-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e5d/5808145/e78cda7eabaa/peerj-06-4278-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e5d/5808145/954ccec2b924/peerj-06-4278-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e5d/5808145/1b5566540390/peerj-06-4278-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e5d/5808145/4128075749c8/peerj-06-4278-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e5d/5808145/7183a646de1f/peerj-06-4278-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e5d/5808145/fe55c8f7d773/peerj-06-4278-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e5d/5808145/b65fb93da3e6/peerj-06-4278-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e5d/5808145/e78cda7eabaa/peerj-06-4278-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e5d/5808145/954ccec2b924/peerj-06-4278-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e5d/5808145/1b5566540390/peerj-06-4278-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e5d/5808145/4128075749c8/peerj-06-4278-g007.jpg

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