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扁形动物再生作为解剖结构动态平衡的模型:生物物理和计算方法的最新进展。

Planarian regeneration as a model of anatomical homeostasis: Recent progress in biophysical and computational approaches.

机构信息

Allen Discovery Center at Tufts University, Medford, MA 02155, United States; Biology Department, Tufts University, Medford, MA 02155, United States.

Allen Discovery Center at Tufts University, Medford, MA 02155, United States.

出版信息

Semin Cell Dev Biol. 2019 Mar;87:125-144. doi: 10.1016/j.semcdb.2018.04.003. Epub 2018 May 1.

Abstract

Planarian behavior, physiology, and pattern control offer profound lessons for regenerative medicine, evolutionary biology, morphogenetic engineering, robotics, and unconventional computation. Despite recent advances in the molecular genetics of stem cell differentiation, this model organism's remarkable anatomical homeostasis provokes us with truly fundamental puzzles about the origin of large-scale shape and its relationship to the genome. In this review article, we first highlight several deep mysteries about planarian regeneration in the context of the current paradigm in this field. We then review recent progress in understanding of the physiological control of an endogenous, bioelectric pattern memory that guides regeneration, and how modulating this memory can permanently alter the flatworm's target morphology. Finally, we focus on computational approaches that complement reductive pathway analysis with synthetic, systems-level understanding of morphological decision-making. We analyze existing models of planarian pattern control and highlight recent successes and remaining knowledge gaps in this interdisciplinary frontier field.

摘要

涡虫的行为、生理和模式控制为再生医学、进化生物学、形态发生工程、机器人技术和非传统计算提供了深刻的启示。尽管在干细胞分化的分子遗传学方面最近取得了进展,但这种模式生物非凡的解剖稳态使我们对大规模形状的起源及其与基因组的关系产生了真正的基本困惑。在这篇综述文章中,我们首先在该领域当前范式的背景下强调了几个关于涡虫再生的深刻奥秘。然后,我们回顾了最近在理解指导再生的内源性生物电模式记忆的生理控制方面的进展,以及如何调节这种记忆可以永久改变扁形虫的目标形态。最后,我们专注于计算方法,这些方法通过对形态决策的合成、系统级理解来补充简约途径分析。我们分析了涡虫模式控制的现有模型,并强调了这一跨学科前沿领域的最新成功和遗留知识差距。

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