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Ecological and genomic profiling of anaerobic methane-oxidizing archaea in a deep granitic environment.深部花岗岩环境中厌氧甲烷氧化古菌的生态与基因组分析
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2
Anaerobic Methanotrophic Archaea of the ANME-2d Cluster Are Active in a Low-sulfate, Iron-rich Freshwater Sediment.ANME-2d簇的厌氧甲烷营养古菌在低硫酸盐、富铁淡水沉积物中具有活性。
Front Microbiol. 2017 Apr 12;8:619. doi: 10.3389/fmicb.2017.00619. eCollection 2017.
3
Potential for microbial H and metal transformations associated with novel bacteria and archaea in deep terrestrial subsurface sediments.与深层陆地地下沉积物中新型细菌和古菌相关的微生物氢和金属转化潜力。
ISME J. 2017 Aug;11(8):1915-1929. doi: 10.1038/ismej.2017.39. Epub 2017 Mar 28.
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Energy Metabolism during Anaerobic Methane Oxidation in ANME Archaea.厌氧甲烷氧化古菌(ANME)中厌氧甲烷氧化过程中的能量代谢
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Reverse Methanogenesis and Respiration in Methanotrophic Archaea.甲烷营养古菌中的反向产甲烷作用与呼吸作用
Archaea. 2017 Jan 5;2017:1654237. doi: 10.1155/2017/1654237. eCollection 2017.
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Archaea catalyze iron-dependent anaerobic oxidation of methane.古生菌催化铁依赖型甲烷厌氧氧化。
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8
Artificial electron acceptors decouple archaeal methane oxidation from sulfate reduction.人工电子受体可使古菌甲烷氧化与硫酸盐还原脱耦。
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9
A Metagenomics-Based Metabolic Model of Nitrate-Dependent Anaerobic Oxidation of Methane by Methanoperedens-Like Archaea.基于宏基因组学的类甲烷厌氧氧化菌依赖硝酸盐的甲烷厌氧氧化代谢模型。
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10
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产甲烷古菌通过厌氧甲烷氧化作用与三价铁还原相耦合。

A methanotrophic archaeon couples anaerobic oxidation of methane to Fe(III) reduction.

机构信息

Advanced Water Management Centre, Faculty of Engineering, Architecture and Information Technology, The University of Queensland, Brisbane, QLD, Australia.

Australian Centre for Ecogenomics, School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, QLD, Australia.

出版信息

ISME J. 2018 Aug;12(8):1929-1939. doi: 10.1038/s41396-018-0109-x. Epub 2018 Apr 16.

DOI:10.1038/s41396-018-0109-x
PMID:29662147
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6052012/
Abstract

Microbially mediated anaerobic oxidation of methane (AOM) is a key process in the regulation of methane emissions to the atmosphere. Iron can serve as an electron acceptor for AOM, and it has been suggested that Fe(III)-dependent AOM potentially comprises a major global methane sink. Although it has been proposed that anaerobic methanotrophic (ANME) archaea can facilitate this process, their active metabolic pathways have not been confirmed. Here we report the enrichment and characterisation of a novel archaeon in a laboratory-scale bioreactor fed with Fe(III) oxide (ferrihydrite) and methane. Long-term performance data, in conjunction with the C- and Fe-labelling batch experiments, demonstrated that AOM was coupled to Fe(III) reduction to Fe(II) in this bioreactor. Metagenomic analysis showed that this archaeon belongs to a novel genus within family Candidatus Methanoperedenaceae, and possesses genes encoding the "reverse methanogenesis" pathway, as well as multi-heme c-type cytochromes which are hypothesised to facilitate dissimilatory Fe(III) reduction. Metatranscriptomic analysis revealed upregulation of these genes, supporting that this archaeon can independently mediate AOM using Fe(III) as the terminal electron acceptor. We propose the name Candidatus "Methanoperedens ferrireducens" for this microorganism. The potential role of "M. ferrireducens" in linking the carbon and iron cycles in environments rich in methane and iron should be investigated in future research.

摘要

微生物介导的甲烷厌氧氧化(AOM)是调节甲烷向大气排放的关键过程。铁可以作为 AOM 的电子受体,并且有人提出,依赖铁的 AOM 可能构成了一个主要的全球甲烷汇。尽管有人提出厌氧甲烷营养菌(ANME)古菌可以促进这一过程,但它们的活性代谢途径尚未得到证实。在这里,我们报告了在一个用三价铁氧化物(水铁矿)和甲烷喂养的实验室规模生物反应器中,一种新型古菌的富集和特性。长期性能数据,结合 C 和 Fe 标记的批量实验,表明在这个生物反应器中,AOM 与 Fe(III)还原到 Fe(II)偶联。宏基因组分析表明,这种古菌属于 Candidatus Methanoperedenaceae 家族中的一个新属,并且拥有编码“反向产甲烷”途径的基因,以及多血红素 c 型细胞色素,这些被假设有助于异化 Fe(III)还原。代谢组学分析显示这些基因的上调,支持这种古菌可以独立地将 Fe(III)作为末端电子受体来介导 AOM。我们建议将这种微生物命名为“Methanoperedens ferrireducens”。在富含甲烷和铁的环境中,“M. ferrireducens”在连接碳和铁循环方面的潜在作用应该在未来的研究中进行调查。