• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

遗传密码扩展:理解氧化应激蛋白修饰的生理后果的有力工具。

Genetic Code Expansion: A Powerful Tool for Understanding the Physiological Consequences of Oxidative Stress Protein Modifications.

机构信息

Department of Biochemistry and Biophysics, Oregon State University, 2011 Agriculture and Life Sciences Building, Corvallis, OR 97331, USA.

出版信息

Oxid Med Cell Longev. 2018 Apr 23;2018:7607463. doi: 10.1155/2018/7607463. eCollection 2018.

DOI:10.1155/2018/7607463
PMID:29849913
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5937447/
Abstract

Posttranslational modifications resulting from oxidation of proteins (Ox-PTMs) are present intracellularly under conditions of oxidative stress as well as basal conditions. In the past, these modifications were thought to be generic protein damage, but it has become increasingly clear that Ox-PTMs can have specific physiological effects. It is an arduous task to distinguish between the two cases, as multiple Ox-PTMs occur simultaneously on the same protein, convoluting analysis. Genetic code expansion (GCE) has emerged as a powerful tool to overcome this challenge as it allows for the site-specific incorporation of an Ox-PTM into translated protein. The resulting homogeneously modified protein products can then be rigorously characterized for the effects of individual Ox-PTMs. We outline the strengths and weaknesses of GCE as they relate to the field of oxidative stress and Ox-PTMs. An overview of the Ox-PTMs that have been genetically encoded and applications of GCE to the study of Ox-PTMs, including antibody validation and therapeutic development, is described.

摘要

氧化应激条件下和基础条件下,蛋白质氧化后的翻译后修饰(Ox-PTMs)存在于细胞内。过去,这些修饰被认为是通用的蛋白质损伤,但越来越清楚的是,Ox-PTMs 可以具有特定的生理效应。由于同一蛋白质上同时发生多种 Ox-PTM,使得区分这两种情况变得非常困难,分析也变得复杂。遗传密码扩展(GCE)的出现为克服这一挑战提供了一种强大的工具,因为它允许在翻译的蛋白质中特异性地掺入 Ox-PTM。然后,可以对产生的均一修饰的蛋白质产物进行严格的特征分析,以研究单个 Ox-PTM 的影响。我们概述了 GCE 与氧化应激和 Ox-PTM 领域相关的优缺点。概述了已被遗传编码的 Ox-PTM 以及 GCE 在 Ox-PTM 研究中的应用,包括抗体验证和治疗开发。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29bd/5937447/03b8114a29e9/OMCL2018-7607463.004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29bd/5937447/7dd7a6b32497/OMCL2018-7607463.001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29bd/5937447/0f1233429381/OMCL2018-7607463.002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29bd/5937447/1aa2a96dba84/OMCL2018-7607463.003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29bd/5937447/03b8114a29e9/OMCL2018-7607463.004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29bd/5937447/7dd7a6b32497/OMCL2018-7607463.001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29bd/5937447/0f1233429381/OMCL2018-7607463.002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29bd/5937447/1aa2a96dba84/OMCL2018-7607463.003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29bd/5937447/03b8114a29e9/OMCL2018-7607463.004.jpg

相似文献

1
Genetic Code Expansion: A Powerful Tool for Understanding the Physiological Consequences of Oxidative Stress Protein Modifications.遗传密码扩展:理解氧化应激蛋白修饰的生理后果的有力工具。
Oxid Med Cell Longev. 2018 Apr 23;2018:7607463. doi: 10.1155/2018/7607463. eCollection 2018.
2
Functional analysis of protein post-translational modifications using genetic codon expansion.利用遗传密码子扩展进行蛋白质翻译后修饰的功能分析。
Protein Sci. 2023 Apr;32(4):e4618. doi: 10.1002/pro.4618.
3
New Strategies for Probing the Biological Functions of Protein Post-translational Modifications in Mammalian Cells with Genetic Code Expansion.利用遗传密码扩展技术在哺乳动物细胞中探测蛋白质翻译后修饰的生物学功能的新策略。
Acc Chem Res. 2023 Oct 17;56(20):2827-2837. doi: 10.1021/acs.accounts.3c00460. Epub 2023 Oct 4.
4
Recent Development of Genetic Code Expansion for Posttranslational Modification Studies.遗传密码扩展在翻译后修饰研究中的最新进展。
Molecules. 2018 Jul 8;23(7):1662. doi: 10.3390/molecules23071662.
5
The central role of tRNA in genetic code expansion.tRNA 在遗传密码扩展中的核心作用。
Biochim Biophys Acta Gen Subj. 2017 Nov;1861(11 Pt B):3001-3008. doi: 10.1016/j.bbagen.2017.03.012. Epub 2017 Mar 18.
6
Oxidative post-translational modifications of cysteine residues in plant signal transduction.植物信号转导中半胱氨酸残基的氧化翻译后修饰
J Exp Bot. 2015 May;66(10):2923-34. doi: 10.1093/jxb/erv084. Epub 2015 Mar 5.
7
Genetic code expansion.遗传密码扩展
Nat Struct Biol. 2003 Jun;10(6):414-6. doi: 10.1038/nsb0603-414.
8
Orthogonal Translation for Site-Specific Installation of Post-translational Modifications.用于翻译后修饰的定点安装的正交翻译。
Chem Rev. 2024 Mar 13;124(5):2805-2838. doi: 10.1021/acs.chemrev.3c00850. Epub 2024 Feb 19.
9
Applications of Genetic Code Expansion in Studying Protein Post-translational Modification.遗传密码扩展在蛋白质翻译后修饰研究中的应用
J Mol Biol. 2022 Apr 30;434(8):167424. doi: 10.1016/j.jmb.2021.167424. Epub 2021 Dec 28.
10
A chemical toolkit for proteins--an expanded genetic code.蛋白质的化学工具包——扩展的遗传密码。
Nat Rev Mol Cell Biol. 2006 Oct;7(10):775-82. doi: 10.1038/nrm2005. Epub 2006 Aug 23.

引用本文的文献

1
Cracking the Code: Reprogramming the Genetic Script in Prokaryotes and Eukaryotes to Harness the Power of Noncanonical Amino Acids.破解密码:在原核生物和真核生物中重新编程遗传密码以利用非规范氨基酸的力量。
Chem Rev. 2024 Sep 25;124(18):10281-10362. doi: 10.1021/acs.chemrev.3c00878. Epub 2024 Aug 9.
2
Evolution of Pyrrolysyl-tRNA Synthetase: From Methanogenesis to Genetic Code Expansion.吡咯赖氨酰-tRNA 合成酶的进化:从产甲烷作用到遗传密码扩展。
Chem Rev. 2024 Aug 28;124(16):9580-9608. doi: 10.1021/acs.chemrev.4c00031. Epub 2024 Jul 2.
3
Orthogonal Translation for Site-Specific Installation of Post-translational Modifications.

本文引用的文献

1
Expanding and reprogramming the genetic code.扩展和重编程遗传密码。
Nature. 2017 Oct 4;550(7674):53-60. doi: 10.1038/nature24031.
2
Photoactivatable Mussel-Based Underwater Adhesive Proteins by an Expanded Genetic Code.通过扩展遗传密码实现的基于贻贝的光可激活水下粘附蛋白
Chembiochem. 2017 Sep 19;18(18):1819-1823. doi: 10.1002/cbic.201700327. Epub 2017 Aug 1.
3
Site-specific incorporation of phosphotyrosine using an expanded genetic code.利用扩展遗传密码实现磷酸酪氨酸的位点特异性掺入。
用于翻译后修饰的定点安装的正交翻译。
Chem Rev. 2024 Mar 13;124(5):2805-2838. doi: 10.1021/acs.chemrev.3c00850. Epub 2024 Feb 19.
4
Sortase A transpeptidation produces seamless, unbranched biotinylated nanobodies for multivalent and multifunctional applications.分选酶A转肽作用可产生无缝、无分支的生物素化纳米抗体,用于多价和多功能应用。
Nanoscale Adv. 2023 Mar 15;5(8):2251-2260. doi: 10.1039/d3na00014a. eCollection 2023 Apr 11.
5
Dual incorporation of non-canonical amino acids enables production of post-translationally modified selenoproteins.非标准氨基酸的双重掺入能够产生翻译后修饰的硒蛋白。
Front Mol Biosci. 2023 Jan 24;10:1096261. doi: 10.3389/fmolb.2023.1096261. eCollection 2023.
6
Expanding the eukaryotic genetic code with a biosynthesized 21st amino acid.利用生物合成的第 21 种氨基酸扩展真核生物的遗传密码。
Protein Sci. 2022 Oct;31(10):e4443. doi: 10.1002/pro.4443.
7
Creating a Selective Nanobody Against 3-Nitrotyrosine Containing Proteins.制备针对含3-硝基酪氨酸蛋白的选择性纳米抗体。
Front Chem. 2022 Feb 21;10:835229. doi: 10.3389/fchem.2022.835229. eCollection 2022.
8
Overcoming Near-Cognate Suppression in a Release Factor 1-Deficient Host with an Improved Nitro-Tyrosine tRNA Synthetase.用改良的硝基酪氨酸 tRNA 合成酶克服释放因子 1 缺陷型宿主中的近同系物抑制。
J Mol Biol. 2020 Jul 24;432(16):4690-4704. doi: 10.1016/j.jmb.2020.06.014. Epub 2020 Jun 19.
9
Site-specific 5-hydroxytryptophan incorporation into apolipoprotein A-I impairs cholesterol efflux activity and high-density lipoprotein biogenesis.载脂蛋白 A-I 中的特定 5-羟色氨酸掺入会损害胆固醇外排活性和高密度脂蛋白的生成。
J Biol Chem. 2020 Apr 10;295(15):4836-4848. doi: 10.1074/jbc.RA119.012092. Epub 2020 Feb 25.
10
Efficient Site-Specific Prokaryotic and Eukaryotic Incorporation of Halotyrosine Amino Acids into Proteins.高效的细菌和真核生物的酪氨酸氨基酸的定点掺入蛋白质。
ACS Chem Biol. 2020 Feb 21;15(2):562-574. doi: 10.1021/acschembio.9b01026. Epub 2020 Feb 10.
Nat Chem Biol. 2017 Aug;13(8):842-844. doi: 10.1038/nchembio.2406. Epub 2017 Jun 12.
4
Genetically encoding phosphotyrosine and its nonhydrolyzable analog in bacteria.在细菌中对磷酸酪氨酸及其不可水解类似物进行基因编码。
Nat Chem Biol. 2017 Aug;13(8):845-849. doi: 10.1038/nchembio.2405. Epub 2017 Jun 12.
5
Biosynthesis and genetic encoding of phosphothreonine through parallel selection and deep sequencing.通过平行筛选和深度测序实现磷酸苏氨酸的生物合成与遗传编码
Nat Methods. 2017 Jul;14(7):729-736. doi: 10.1038/nmeth.4302. Epub 2017 May 29.
6
Designing logical codon reassignment - Expanding the chemistry in biology.设计逻辑密码子重新分配——拓展生物学中的化学
Chem Sci. 2015 Jan 1;6(1):50-69. doi: 10.1039/c4sc01534g. Epub 2014 Jul 14.
7
Myeloperoxidase: A new player in autoimmunity.髓过氧化物酶:自身免疫中的新角色。
Cell Immunol. 2017 Jul;317:1-8. doi: 10.1016/j.cellimm.2017.05.002. Epub 2017 May 10.
8
Interrogating the Roles of Post-Translational Modifications of Non-Histone Proteins.探讨非组蛋白蛋白翻译后修饰的作用。
J Med Chem. 2018 Apr 26;61(8):3239-3252. doi: 10.1021/acs.jmedchem.6b01817. Epub 2017 May 24.
9
A specific fluorescent probe reveals compromised activity of methionine sulfoxide reductases in Parkinson's disease.一种特异性荧光探针揭示了帕金森病中甲硫氨酸亚砜还原酶的活性受损。
Chem Sci. 2017 Apr 1;8(4):2966-2972. doi: 10.1039/c6sc04708d. Epub 2017 Jan 27.
10
An orthogonalized platform for genetic code expansion in both bacteria and eukaryotes.在细菌和真核生物中进行遗传密码扩展的正交化平台。
Nat Chem Biol. 2017 Apr;13(4):446-450. doi: 10.1038/nchembio.2312. Epub 2017 Feb 13.