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酵母细胞中参与碲酸盐抗性的线粒体核糖体蛋白。

Mitochondrial ribosomal proteins involved in tellurite resistance in yeast Saccharomyces cerevisiae.

机构信息

Istituto di Bioscienze e BioRisorse-UOS Portici-CNR c/o Dipartimento di Biologia, Sezione di Igiene, Via Mezzocannone 16, Napoli, 80134, Italy.

Consiglio per la ricerca in agricoltura e l'analisi dell'economia agraria, Via Stezzano 24, Bergamo, 24126, Italy.

出版信息

Sci Rep. 2018 Aug 13;8(1):12022. doi: 10.1038/s41598-018-30479-6.

Abstract

A considerable body of evidence links together mitochondrial dysfunctions, toxic action of metalloid oxyanions, and system and neurodegenerative disorders. In this study we have used the model yeast Saccharomyces cerevisiae to investigate the genetic determinants associated with tellurite resistance/sensitivity. Nitrosoguanidine-induced KTeO-resistant mutants were isolated, and one of these mutants, named Sc57-Te, was characterized. Both random spore analysis and tetrad analysis and growth of heterozygous (Te/Te) diploid from Sc57-Te mutant revealed that nuclear and recessive mutation(s) was responsible for the resistance. To get insight into the mechanisms responsible for KTeO-resistance, RNA microarray analyses were performed with KTeO-treated and untreated Sc57-Te cells. A total of 372 differentially expressed loci were identified corresponding to 6.37% of the S. cerevisiae transcriptome. Of these, 288 transcripts were up-regulated upon KTeO treatment. About half of up-regulated transcripts were associated with the following molecular functions: oxidoreductase activity, structural constituent of cell wall, transporter activity. Comparative whole-genome sequencing allowed us to identify nucleotide variants distinguishing Sc57-Te from parental strain Sc57. We detected 15 CDS-inactivating mutations, and found that 3 of them affected genes coding mitochondrial ribosomal proteins (MRPL44 and NAM9) and mitochondrial ribosomal biogenesis (GEP3) pointing out to alteration of mitochondrial ribosome as main determinant of tellurite resistance.

摘要

大量证据表明,线粒体功能障碍、类金属含氧阴离子的毒性作用以及系统和神经退行性疾病之间存在关联。在这项研究中,我们使用模式酵母酿酒酵母来研究与亚碲酸盐抗性/敏感性相关的遗传决定因素。通过亚硝胍诱导筛选出抗亚碲酸盐的 KTeO 突变体,其中一个突变体命名为 Sc57-Te,并对其进行了表征。随机孢子分析和四分体分析以及来自 Sc57-Te 突变体的杂合子(Te/Te)二倍体的生长表明,核和隐性突变是导致抗性的原因。为了深入了解 KTeO 抗性的机制,我们对 KTeO 处理和未处理的 Sc57-Te 细胞进行了 RNA 微阵列分析。总共鉴定出 372 个差异表达基因,占酿酒酵母转录组的 6.37%。其中,288 个转录本在 KTeO 处理后上调。上调转录本的一半左右与以下分子功能相关:氧化还原酶活性、细胞壁结构成分、转运蛋白活性。全基因组比较测序使我们能够识别区分 Sc57-Te 和亲本菌株 Sc57 的核苷酸变异。我们检测到 15 个 CDS 失活突变,发现其中 3 个影响编码线粒体核糖体蛋白(MRPL44 和 NAM9)和线粒体核糖体生物发生(GEP3)的基因,表明线粒体核糖体的改变是亚碲酸盐抗性的主要决定因素。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5ddc/6089990/a889e8b0591d/41598_2018_30479_Fig1_HTML.jpg

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