Analytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, MA 02114, USA; Program in Medical and Population Genetics, Broad Institute of Harvard and MIT, Cambridge, MA 02142, USA; Stanley Center for Psychiatric Research, Broad Institute of Harvard and MIT, Cambridge, MA 02142, USA.
Department of Psychiatry, School of Medicine, College of Health Sciences, Addis Ababa University, Addis Ababa, Ethiopia; Department of Epidemiology, Harvard T. H. Chan School of Public Health, Harvard University, Boston, USA.
Curr Opin Genet Dev. 2018 Dec;53:113-120. doi: 10.1016/j.gde.2018.08.005. Epub 2018 Sep 18.
Human genetic studies have long been vastly Eurocentric, raising a key question about the generalizability of these study findings to other populations. Because humans originated in Africa, these populations retain more genetic diversity, and yet individuals of African descent have been tremendously underrepresented in genetic studies. The diversity in Africa affords ample opportunities to improve fine-mapping resolution for associated loci, discover novel genetic associations with phenotypes, build more generalizable genetic risk prediction models, and better understand the genetic architecture of complex traits and diseases subject to varying environmental pressures. Thus, it is both ethically and scientifically imperative that geneticists globally surmount challenges that have limited progress in African genetic studies to date. Additionally, African investigators need to be meaningfully included, as greater inclusivity and enhanced research capacity afford enormous opportunities to accelerate genomic discoveries that translate more effectively to all populations. We review the advantages, challenges, and examples of genetic architecture studies of complex traits and diseases in Africa. For example, with greater genetic diversity comes greater ancestral heterogeneity; this higher level of understudied diversity can yield novel genetic findings, but some methods that assume homogeneous population structure and work well in European populations may work less well in the presence of greater heterogeneity in African populations. Consequently, we advocate for methodological development that will accelerate studies important for all populations, especially those currently underrepresented in genetics.
人类遗传学研究长期以来在很大程度上是以欧洲为中心的,这引发了一个关键问题,即这些研究发现是否可以推广到其他人群。由于人类起源于非洲,这些人群保留了更多的遗传多样性,但非洲裔个体在遗传学研究中却严重代表性不足。非洲的多样性为提高相关基因座的精细作图分辨率、发现与表型相关的新遗传关联、构建更具普遍性的遗传风险预测模型以及更好地理解受不同环境压力影响的复杂特征和疾病的遗传结构提供了充足的机会。因此,克服迄今为止限制非洲遗传学研究进展的挑战,不仅在伦理上而且在科学上都是必要的。此外,还需要有意义地纳入非洲研究人员,因为更大的包容性和增强的研究能力为加速转化为所有人群的基因组发现提供了巨大的机会。我们回顾了非洲复杂特征和疾病遗传结构研究的优势、挑战和实例。例如,遗传多样性越大,其祖先异质性就越大;这种更高水平的未被充分研究的多样性可以产生新的遗传发现,但一些假设群体结构同质且在欧洲人群中效果良好的方法,在非洲人群中存在更大异质性的情况下,效果可能会较差。因此,我们提倡开发方法学,以加速对所有人群都重要的研究,特别是那些在遗传学中代表性不足的人群。