瓦登斯维勒假单胞菌CCOS 864的高质量基因组草图序列
High-Quality Draft Genome Sequence of Pseudomonas wadenswilerensis CCOS 864.
作者信息
Rutz Dominik, Frasson David, Sievers Martin, Blom Jochen, Rezzonico Fabio, Pothier Joël F, Smits Theo H M
机构信息
Environmental Genomics and Systems Biology Research Group, Institute of Natural Resource Sciences, Zurich University of Applied Sciences (ZHAW), Wädenswil, Switzerland.
Microbiology and Molecular Biology Research Group, Institute of Chemistry and Biotechnology, Zurich University of Applied Sciences (ZHAW), Wädenswil, Switzerland.
出版信息
Microbiol Resour Announc. 2018 Oct 25;7(16). doi: 10.1128/MRA.01059-18. eCollection 2018 Oct.
Abstract
Pseudomonas wadenswilerensis CCOS 864 was isolated in 2014 from forest soil. The organism belongs taxonomically to the Pseudomonas putida group, members of which have been well studied for their potential in biotechnological applications. We present here the draft genome sequence of P. wadenswilerensis CCOS 864.
摘要
瓦登斯维勒假单胞菌CCOS 864于2014年从森林土壤中分离得到。该菌株在分类学上属于恶臭假单胞菌群，该菌群成员因其在生物技术应用方面的潜力而得到了充分研究。我们在此展示瓦登斯维勒假单胞菌CCOS 864的基因组草图序列。
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2
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3
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4
JSpeciesWS: a web server for prokaryotic species circumscription based on pairwise genome comparison.JSpeciesWS：一个基于成对基因组比较进行原核生物物种界定的网络服务器。
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