Linderstrøm-Lang Centre for Protein Science, Department of Biology, University of Copenhagen, Copenhagen, Denmark.
Departments of Genome Sciences and Bioengineering, University of Washington, Seattle, WA, USA.
Trends Biochem Sci. 2019 Jul;44(7):575-588. doi: 10.1016/j.tibs.2019.01.003. Epub 2019 Jan 31.
The rapid decrease in DNA sequencing cost is revolutionizing medicine and science. In medicine, genome sequencing has revealed millions of missense variants that change protein sequences, yet we only understand the molecular and phenotypic consequences of a small fraction. Within protein science, high-throughput deep mutational scanning experiments enable us to probe thousands of variants in a single, multiplexed experiment. We review efforts that bring together these topics via experimental and computational approaches to determine the consequences of missense variants in proteins. We focus on the role of changes in protein stability as a driver for disease, and how experiments, biophysical models, and computation are providing a framework for understanding and predicting how changes in protein sequence affect cellular protein stability.
DNA 测序成本的迅速下降正在彻底改变医学和科学。在医学领域,基因组测序揭示了数百万个改变蛋白质序列的错义变异,但我们仅了解一小部分的分子和表型后果。在蛋白质科学中,高通量深度突变扫描实验使我们能够在单个多重实验中探测数千种变体。我们通过实验和计算方法来综述将这些主题结合在一起的工作,以确定蛋白质中错义变异的后果。我们专注于蛋白质稳定性变化作为疾病驱动因素的作用,以及实验、生物物理模型和计算如何为理解和预测蛋白质序列变化如何影响细胞蛋白质稳定性提供框架。