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内在无序蛋白质液-液相分离的完整相图

Complete Phase Diagram for Liquid-Liquid Phase Separation of Intrinsically Disordered Proteins.

作者信息

McCarty James, Delaney Kris T, Danielsen Scott P O, Fredrickson Glenn H, Shea Joan-Emma

机构信息

Department of Chemistry and Biochemistry , University of California , Santa Barbara , California 93106 , United States.

Materials Research Laboratory , University of California , Santa Barbara , California 93106 , United States.

出版信息

J Phys Chem Lett. 2019 Apr 18;10(8):1644-1652. doi: 10.1021/acs.jpclett.9b00099. Epub 2019 Mar 27.

Abstract

A number of intrinsically disordered proteins have been shown to self-assemble via liquid-liquid phase separation into protein-rich and dilute phases. The resulting coacervates can have important biological functions, and the ability to form these assemblies is dictated by the protein's primary amino acid sequence as well as by the solution conditions. We present a complete phase diagram for the simple coacervation of a polyampholyte intrinsically disordered protein using a field-theoretic simulation approach. We show that differences in the primary amino acid sequence and in the distribution of charged amino acids along the sequence lead to differences in the phase window for coacervation, with block-charged sequences having a larger coacervation window than sequences with a random patterning of charges. The model also captures how changing solution conditions modifies the phase diagram and can serve to guide experimental studies.

摘要

许多内在无序蛋白质已被证明可通过液-液相分离自组装成富含蛋白质的相和稀相。由此产生的凝聚层可能具有重要的生物学功能,形成这些聚集体的能力由蛋白质的一级氨基酸序列以及溶液条件决定。我们使用场论模拟方法给出了一种聚两性电解质内在无序蛋白质简单凝聚的完整相图。我们表明,一级氨基酸序列的差异以及带电氨基酸沿序列的分布导致凝聚相窗口的差异,带嵌段电荷的序列比具有随机电荷模式的序列具有更大的凝聚窗口。该模型还描述了溶液条件的变化如何改变相图,并可用于指导实验研究。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8aef/7379843/1c1e53c73a63/nihms-1602594-f0002.jpg

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