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人类线粒体核糖体回收的独特特征的结构见解。

Structural insights into unique features of the human mitochondrial ribosome recycling.

机构信息

Division of Translational Medicine, Wadsworth Center, New York State Department of Health, Albany, NY 12201-0509.

Division of Translational Medicine, Wadsworth Center, New York State Department of Health, Albany, NY 12201-0509;

出版信息

Proc Natl Acad Sci U S A. 2019 Apr 23;116(17):8283-8288. doi: 10.1073/pnas.1815675116. Epub 2019 Apr 8.

Abstract

Mammalian mitochondrial ribosomes (mitoribosomes) are responsible for synthesizing proteins that are essential for oxidative phosphorylation (ATP generation). Despite their common ancestry with bacteria, the composition and structure of the human mitoribosome and its translational factors are significantly different from those of their bacterial counterparts. The mammalian mitoribosome recycling factor (RRF) carries a mito-specific N terminus extension (NTE), which is necessary for the function of RRF Here we present a 3.9-Å resolution cryo-electron microscopic (cryo-EM) structure of the human 55S mitoribosome-RRF complex, which reveals α-helix and loop structures for the NTE that makes multiple mito-specific interactions with functionally critical regions of the mitoribosome. These include ribosomal RNA segments that constitute the peptidyl transferase center (PTC) and those that connect PTC with the GTPase-associated center and with mitoribosomal proteins L16 and L27. Our structure reveals the presence of a tRNA in the pe/E position and a rotation of the small mitoribosomal subunit on RRF binding. In addition, we observe an interaction between the pe/E tRNA and a mito-specific protein, mL64. These findings help understand the unique features of mitoribosome recycling.

摘要

哺乳动物线粒体核糖体(mitoribosomes)负责合成对氧化磷酸化(ATP 生成)至关重要的蛋白质。尽管它们与细菌有着共同的祖先,但人类线粒体核糖体及其翻译因子的组成和结构与细菌的核糖体及其翻译因子有很大的不同。哺乳动物线粒体核糖体回收因子(RRF)携带一个线粒体特异性的 N 端延伸(NTE),这对于 RRF 的功能是必需的。在这里,我们呈现了一个分辨率为 3.9Å 的人类 55S 线粒体核糖体-RRF 复合物的冷冻电镜(cryo-EM)结构,该结构揭示了 NTE 的α-螺旋和环结构,与线粒体核糖体的功能关键区域进行了多种线粒体特异性相互作用。这些相互作用包括构成肽基转移酶中心(PTC)的核糖体 RNA 片段,以及将 PTC 与 GTPase 相关中心以及与线粒体核糖体蛋白 L16 和 L27 连接的 RNA 片段。我们的结构揭示了在 pe/E 位置存在一个 tRNA,以及在 RRF 结合时小线粒体亚基的旋转。此外,我们观察到 pe/E tRNA 与一种线粒体特异性蛋白 mL64 之间的相互作用。这些发现有助于理解线粒体核糖体回收的独特特征。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1455/6486771/05b84f9a2cf7/pnas.1815675116fig01.jpg

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