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大肠杆菌中甘露醇(mtl)操纵子的核苷酸序列。

Nucleotide sequence of the mannitol (mtl) operon in Escherichia coli.

作者信息

Davis T, Yamada M, Elgort M, Saier M H

机构信息

Department of Biology, University of California at San Diego, La Jolla 92093.

出版信息

Mol Microbiol. 1988 May;2(3):405-12. doi: 10.1111/j.1365-2958.1988.tb00045.x.

Abstract

The nucleotide sequence of the known portions of the mannitol operon in Escherichia coli (mtlOPAD) has been determined. Both the operator-promoter region and the intercistronic region between the mtlA and mtlD genes (encoding the mannitol-specific Enzyme II of the phosphotransferase system and mannitol-1-phosphate dehydrogenase, respectively) show parallels with corresponding regions of the glucitol (gut) operon, but neither the mtlA nor the mtlD gene products show obvious homology with the corresponding gene products of the glucitol operon. Five potential cyclic AMP receptor protein binding sites were identified in the mtlOP region, all showing near identity with the consensus sequence. Four regions of dyad symmetry (four to seven bases in length), serving as potential repressor binding sites, overlap with the potential cyclic AMP receptor protein binding sites. Repetitive extragenic palindromic (REP) sequences, forming stem-loop structures in the intercistronic region between mtlA and mtlD and following the mtlD gene were identified. Probable terminator sequences were not found in any of these three regulatory regions. Mannitol-1-phosphate dehydrogenase exhibits two overlapping, potential NAD+ binding sites near the N-terminus of the protein. Computer techniques were used to analyse the mtlD gene and its product.

摘要

已确定大肠杆菌中甘露醇操纵子(mtlOPAD)已知部分的核苷酸序列。操纵子 - 启动子区域以及mtlA和mtlD基因之间的基因间区域(分别编码磷酸转移酶系统的甘露醇特异性酶II和甘露醇 - 1 - 磷酸脱氢酶)与山梨醇(gut)操纵子的相应区域具有相似性,但mtlA和mtlD基因产物与山梨醇操纵子的相应基因产物均未显示出明显的同源性。在mtlOP区域鉴定出五个潜在的环腺苷酸受体蛋白结合位点,所有位点与共有序列几乎完全相同。四个二元对称区域(长度为四至七个碱基),作为潜在的阻遏物结合位点,与潜在的环腺苷酸受体蛋白结合位点重叠。在mtlA和mtlD之间的基因间区域以及mtlD基因之后鉴定出形成茎环结构的重复基因外回文(REP)序列。在这三个调控区域中的任何一个中均未发现可能的终止子序列。甘露醇 - 1 - 磷酸脱氢酶在蛋白质的N端附近表现出两个重叠的潜在NAD + 结合位点。使用计算机技术分析mtlD基因及其产物。

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