Khateri Parisa, Fischer Jannis, Lustermann Werner, Tsoumpas Charalampos, Dissertori Günther
Institute for Particle Physics and Astrophysics, Department of Physics, ETH Zürich, Zürich, Switzerland.
Leeds Institute of Cardiovascular and Metabolic Medicine, University of Leeds, Leeds, UK.
EJNMMI Phys. 2019 Jul 29;6(1):15. doi: 10.1186/s40658-019-0248-9.
Software for Tomographic Image Reconstruction (STIR) is an open-source library for PET and SPECT image reconstruction, implementing iterative reconstruction as well as 2D- and 3D-filtered back projection. Quantitative reconstruction of PET data requires the knowledge of the scanner geometry. Typical scanners, clinical as well as pre-clinical ones, use a block-type geometry. Several rectangular blocks of crystals are arranged into regular polygons. Multiple of such polygons are arranged along the scanner axis. However, the geometrical representation of a scanner provided by STIR is a cylinder made of rings of individual crystals equally distributed in axial and transaxial directions. The data of realistic scanners are projected onto such virtual scanners prior to image reconstruction. This results in reduced quality of the reconstructed image. In this study, we implemented the above-described block geometry into the STIR library, permitting the image reconstruction without the interpolation step. In order to evaluate the difference in image quality, we performed Monte Carlo simulation studies of three different scanner designs: two scanners with multiple crystals per block and one with a single crystal per block. Simulated data were reconstructed using the standard STIR method and the newly implemented block geometry.
Visual comparison between the images reconstructed by the two models for the block-type scanners shows that the new implementation enhances the image quality to the extent that the results before normalization correction are comparable with those after normalization correction. The simulation result of a uniform cylinder shows that the coefficient of variation decreases from 25.8% to 20.9% by using the new implementation in STIR. Spatial resolution is enhanced resulting in a lower partial loss of intensity in sources of small size, e.g., the spill-over ratio for spherical sources of 1.8 mm diameter is 0.19 in the block and 0.34 in the cylindrical model.
Results indicate a significant improvement for the new model in comparison with the old one which mapped the polygonal geometry into a cylinder. The new implementation was tested and is available for use via the library of Swiss Federal Institute of Technology in Zurich (ETH).
断层图像重建软件(STIR)是一个用于PET和SPECT图像重建的开源库,实现了迭代重建以及二维和三维滤波反投影。PET数据的定量重建需要了解扫描仪的几何结构。典型的扫描仪,包括临床和临床前的扫描仪,采用块状几何结构。多个矩形晶体块排列成规则多边形。多个这样的多边形沿扫描仪轴排列。然而,STIR提供的扫描仪几何表示是一个由在轴向和横向均匀分布的单个晶体环组成的圆柱体。在图像重建之前,将实际扫描仪的数据投影到这样的虚拟扫描仪上。这导致重建图像质量下降。在本研究中,我们将上述块状几何结构实现到STIR库中,从而无需插值步骤即可进行图像重建。为了评估图像质量的差异,我们对三种不同的扫描仪设计进行了蒙特卡罗模拟研究:两种每块有多个晶体的扫描仪和一种每块有单个晶体的扫描仪。使用标准的STIR方法和新实现的块状几何结构对模拟数据进行重建。
对块状扫描仪的两种模型重建的图像进行视觉比较表明,新实现将图像质量提高到了归一化校正前的结果与归一化校正后的结果相当的程度。均匀圆柱体的模拟结果表明,通过在STIR中使用新实现,变异系数从25.8%降至20.9%。空间分辨率得到提高,导致小尺寸源中强度的部分损失降低,例如,直径为1.8毫米的球形源在块状模型中的溢出率为0.19,在圆柱形模型中为0.34。
结果表明,与将多边形几何结构映射到圆柱体的旧模型相比,新模型有显著改进。新实现已经过测试,可通过苏黎世瑞士联邦理工学院(ETH)的库使用。