Goh's BioComputing, Singapore 548957, Singapore.
Center for Computational Biology, Indiana and Bioinformatics, Indiana University School of Medicine, Indianapolis, IN 46202, USA.
Biomolecules. 2019 Nov 6;9(11):710. doi: 10.3390/biom9110710.
(ZIKV) was first discovered in 1947 in Africa. Since then, sporadic ZIKV infections of humans have been reported in Africa and Asia. For a long time, this virus was mostly unnoticed due to its mild symptoms and low fatality rates. However, during the 2015-2016 epidemic in Central and South America, when millions of people were infected, it was discovered that ZIKV causes microcephaly in the babies of mothers infected during pregnancy. An examination of the M and C proteins of the ZIKV shell using the disorder predictor PONDR VLXT revealed that the M protein contains relatively high disorder levels comparable only to those of the yellow fever virus (YFV). On the other hand, the disorder levels in the C protein are relatively low, which can account for the low case fatality rate (CFR) of this virus in contrast to the more virulent YFV, which is characterized by high disorder in its C protein. A larger variation was found in the percentage of intrinsic disorder (PID) in the C protein of various ZIKV strains. Strains of African lineage are characterized by higher PIDs. Using both in vivo and in vitro experiments, laboratories have also previously shown that strains of African origin have a greater potential to inflict higher fetal morbidity than do strains of Asian lineage, with dengue-2 virus (DENV-2) having the least potential. Strong correlations were found between the potential to inflict fetal morbidity and shell disorder in ZIKV ( = 0.9) and DENV-2 (DENV-2 + ZIKV, = 0.8). A strong correlation between CFR and PID was also observed when ZIKV was included in an analysis of sets of shell proteins from a variety of flaviviruses ( = 0.8). These observations have potential implications for antiviral vaccine development and for the design of cancer therapeutics in terms of developing therapeutic viruses that penetrate hard-to-reach organs.
(ZIKV)于 1947 年首次在非洲发现。此后,在非洲和亚洲有零星的人类 ZIKV 感染报告。由于其症状轻微且死亡率低,很长一段时间以来,这种病毒并没有引起太多关注。然而,在 2015-2016 年中美洲和南美洲的疫情中,当数百万人感染时,人们发现 ZIKV 会导致孕妇感染后婴儿出现小头畸形。使用无序预测器 PONDR VLXT 对 ZIKV 外壳的 M 和 C 蛋白进行检查,结果表明 M 蛋白含有相对较高的无序水平,仅可与黄热病毒(YFV)相媲美。另一方面,C 蛋白的无序水平相对较低,这可以解释与更具毒性的 YFV 相比,该病毒的病例死亡率(CFR)较低,YFV 的 C 蛋白无序水平较高。在各种 ZIKV 株的 C 蛋白中,固有无序(PID)的百分比存在更大的变化。非洲谱系的株系特征是 PID 较高。实验室以前还使用体内和体外实验表明,与亚洲谱系的株系相比,非洲起源的株系具有更大的造成更高胎儿发病率的潜力,登革热 2 型病毒(DENV-2)的潜力最小。在 ZIKV(=0.9)和 DENV-2(DENV-2+ZIKV,=0.8)中,发现了壳无序与造成胎儿发病率之间的强相关性。当将 ZIKV 纳入一组来自各种黄病毒的壳蛋白的分析中时,也观察到了 CFR 和 PID 之间的强相关性(=0.8)。这些观察结果对于抗病毒疫苗的开发以及开发穿透难以到达的器官的治疗性病毒的癌症治疗学设计具有潜在意义。