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本文引用的文献

1
MRI-only based synthetic CT generation using dense cycle consistent generative adversarial networks.基于磁共振成像的全合成 CT 生成方法:使用密集循环一致生成对抗网络。
Med Phys. 2019 Aug;46(8):3565-3581. doi: 10.1002/mp.13617. Epub 2019 Jun 12.
2
Ultrasound prostate segmentation based on multidirectional deeply supervised V-Net.基于多方向深度监督 V-Net 的前列腺超声图像分割。
Med Phys. 2019 Jul;46(7):3194-3206. doi: 10.1002/mp.13577. Epub 2019 May 29.
3
Multiparametric MRI-guided dose boost to dominant intraprostatic lesions in CT-based High-dose-rate prostate brachytherapy.基于CT的高剂量率前列腺近距离放射治疗中多参数MRI引导下对前列腺内主要病灶的剂量增强
Br J Radiol. 2019 May;92(1097):20190089. doi: 10.1259/bjr.20190089. Epub 2019 Apr 9.
4
Automatic Segmentation of the Prostate on CT Images Using Deep Neural Networks (DNN).基于深度神经网络(DNN)的 CT 图像前列腺自动分割。
Int J Radiat Oncol Biol Phys. 2019 Jul 15;104(4):924-932. doi: 10.1016/j.ijrobp.2019.03.017. Epub 2019 Mar 16.
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Attention gated networks: Learning to leverage salient regions in medical images.注意门控网络:学习利用医学图像中的显著区域。
Med Image Anal. 2019 Apr;53:197-207. doi: 10.1016/j.media.2019.01.012. Epub 2019 Feb 5.
6
Dose evaluation of MRI-based synthetic CT generated using a machine learning method for prostate cancer radiotherapy.基于机器学习方法生成的用于前列腺癌放疗的磁共振成像合成计算机断层扫描的剂量评估
Med Dosim. 2019;44(4):e64-e70. doi: 10.1016/j.meddos.2019.01.002. Epub 2019 Feb 1.
7
Deeply supervised 3D fully convolutional networks with group dilated convolution for automatic MRI prostate segmentation.基于深度监督的三维全卷积网络与分组空洞卷积在自动 MRI 前列腺分割中的应用。
Med Phys. 2019 Apr;46(4):1707-1718. doi: 10.1002/mp.13416. Epub 2019 Feb 19.
8
A learning-based automatic segmentation and quantification method on left ventricle in gated myocardial perfusion SPECT imaging: A feasibility study.基于学习的门控心肌灌注 SPECT 成像中左心室自动分割和定量方法:一项可行性研究。
J Nucl Cardiol. 2020 Jun;27(3):976-987. doi: 10.1007/s12350-019-01594-2. Epub 2019 Jan 28.
9
Fully automated organ segmentation in male pelvic CT images.男性盆腔 CT 图像的全自动器官分割。
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10
Ultrasound Image Segmentation: A Deeply Supervised Network With Attention to Boundaries.超声图像分割:一种具有边界注意力的深度监督网络。
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基于合成 MRI 辅助深度注意全卷积网络的 CT 前列腺分割。

CT prostate segmentation based on synthetic MRI-aided deep attention fully convolution network.

机构信息

Department of Radiation Oncology and Winship Cancer Institute, Emory University, Atlanta, GA, 30322, USA.

Department of Radiology and Imaging Sciences and Winship Cancer Institute, Emory University, Atlanta, GA, 30322, USA.

出版信息

Med Phys. 2020 Feb;47(2):530-540. doi: 10.1002/mp.13933. Epub 2019 Dec 3.

DOI:10.1002/mp.13933
PMID:31745995
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7764436/
Abstract

PURPOSE

Accurate segmentation of the prostate on computed tomography (CT) for treatment planning is challenging due to CT's poor soft tissue contrast. Magnetic resonance imaging (MRI) has been used to aid prostate delineation, but its final accuracy is limited by MRI-CT registration errors. We developed a deep attention-based segmentation strategy on CT-based synthetic MRI (sMRI) to deal with the CT prostate delineation challenge without MRI acquisition.

METHODS AND MATERIALS

We developed a prostate segmentation strategy which employs an sMRI-aided deep attention network to accurately segment the prostate on CT. Our method consists of three major steps. First, a cycle generative adversarial network was used to estimate an sMRI from CT images. Second, a deep attention fully convolution network was trained based on sMRI and the prostate contours deformed from MRIs. Attention models were introduced to pay more attention to prostate boundary. The prostate contour for a query patient was obtained by feeding the patient's CT images into the trained sMRI generation model and segmentation model.

RESULTS

The segmentation technique was validated with a clinical study of 49 patients by leave-one-out experiments and validated with an additional 50 patients by hold-out test. The Dice similarity coefficient, Hausdorff distance, and mean surface distance indices between our segmented and deformed MRI-defined prostate manual contours were 0.92 ± 0.09, 4.38 ± 4.66, and 0.62 ± 0.89 mm, respectively, with leave-one-out experiments, and were 0.91 ± 0.07, 4.57 ± 3.03, and 0.62 ± 0.65 mm, respectively, with hold-out test.

CONCLUSIONS

We have proposed a novel CT-only prostate segmentation strategy using CT-based sMRI, and validated its accuracy against the prostate contours that were manually drawn on MRI images and deformed to CT images. This technique could provide accurate prostate volume for treatment planning without requiring MRI acquisition, greatly facilitating the routine clinical workflow.

摘要

目的

由于 CT 软组织对比度差,因此对 CT 进行精确的前列腺分割对于治疗计划具有挑战性。磁共振成像(MRI)已用于辅助前列腺描绘,但由于 MRI-CT 配准误差,其最终准确性受到限制。我们开发了一种基于 CT 合成磁共振成像(sMRI)的深度注意分割策略,无需进行 MRI 采集即可解决 CT 前列腺描绘挑战。

方法和材料

我们开发了一种前列腺分割策略,该策略采用 sMRI 辅助深度注意网络在 CT 上准确分割前列腺。我们的方法包括三个主要步骤。首先,使用循环生成对抗网络从 CT 图像估算 sMRI。其次,基于 sMRI 和从 MRI 变形的前列腺轮廓训练深度注意全卷积网络。注意力模型被引入以更关注前列腺边界。通过将患者的 CT 图像输入到训练有素的 sMRI 生成模型和分割模型中,为查询患者获得前列腺轮廓。

结果

通过 49 例患者的留一法实验和 50 例患者的保留法实验对分割技术进行了验证。通过留一法实验,我们分割和变形的 MRI 定义的前列腺手动轮廓之间的 Dice 相似系数,Hausdorff 距离和平均表面距离指数分别为 0.92±0.09,4.38±4.66 和 0.62±0.89mm,而通过保留法实验,这些指数分别为 0.91±0.07,4.57±3.03 和 0.62±0.65mm。

结论

我们提出了一种新颖的基于 CT 的 sMRI 的仅 CT 前列腺分割策略,并根据手动绘制在 MRI 图像上并变形到 CT 图像上的前列腺轮廓验证了其准确性。该技术可以在不进行 MRI 采集的情况下为治疗计划提供准确的前列腺体积,从而极大地促进了常规临床工作流程。