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Scalable and accurate deep learning with electronic health records.借助电子健康记录实现可扩展且准确的深度学习。
NPJ Digit Med. 2018 May 8;1:18. doi: 10.1038/s41746-018-0029-1. eCollection 2018.
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Natural language processing and recurrent network models for identifying genomic mutation-associated cancer treatment change from patient progress notes.用于从患者病程记录中识别基因组突变相关癌症治疗变化的自然语言处理和循环网络模型
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Predicting individual physiologically acceptable states at discharge from a pediatric intensive care unit.预测儿科重症监护病房出院时个体生理可接受状态。
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3D deep learning for detecting pulmonary nodules in CT scans.CT 扫描中肺结节的三维深度学习检测。
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Using machine learning techniques to develop forecasting algorithms for postoperative complications: protocol for a retrospective study.使用机器学习技术开发术后并发症预测算法:一项回顾性研究方案
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Learning representations for the early detection of sepsis with deep neural networks.基于深度学习神经网络的脓毒症早期检测的表示学习。
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Recurrent neural networks for classifying relations in clinical notes.用于对临床记录中的关系进行分类的循环神经网络。
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Predicting mental conditions based on "history of present illness" in psychiatric notes with deep neural networks.基于精神科病历中的“现病史”用深度神经网络预测精神状况。
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Deep Learning for Automated Extraction of Primary Sites From Cancer Pathology Reports.深度学习在癌症病理报告中自动提取原发部位的应用
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基于视觉分析提高准确性的临床文档机器学习死亡率分类。

Machine learning mortality classification in clinical documentation with increased accuracy in visual-based analyses.

作者信息

Slattery Susan M, Knight Daniel C, Weese-Mayer Debra E, Grobman William A, Downey Doug C, Murthy Karna

机构信息

Stanley Manne Children's Research Institute, Chicago, IL, USA.

Feinberg School of Medicine, Northwestern University, Chicago, IL, USA.

出版信息

Acta Paediatr. 2020 Jul;109(7):1346-1353. doi: 10.1111/apa.15109. Epub 2019 Dec 10.

DOI:10.1111/apa.15109
PMID:31762098
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7245545/
Abstract

AIM

The role of machine learning on clinical documentation for predictive outcomes remains undefined. We aimed to compare three neural networks on inpatient providers' notes to predict mortality in neonatal hypoxic-ischaemic encephalopathy (HIE).

METHODS

Using Children's Hospitals Neonatal Database, non-anomalous neonates with HIE treated with therapeutic hypothermia were identified at a single-centre. Data were linked with the initial seven days of documentation. Exposures were derived using the databases and applying convolutional and two recurrent neural networks. The primary outcome was mortality. The predictive accuracy and performance measures for models were determined.

RESULTS

The cohort included 52 eligible infants. Most infants survived (n = 36, 69%) and 23 had severe HIE (44%). Neural networks performed above baseline and differed in their median accuracy for predicting mortality (P = .0001): recurrent models with long short-term memory 69% (25 , 75 percentile 65, 73%) and gated-recurrent model units 65% (62, 69%) and convolutional 72% (64, 96%). Convolutional networks' median specificity was 81% (72, 97%).

CONCLUSION

The neural network models demonstrated fundamental validity in predicting mortality using inpatient provider documentation. Convolutional models had high specificity for (excluding) mortality in neonatal HIE. These findings provide a platform for future model training and ultimately tool development to assist clinicians in patient assessments and risk stratifications.

摘要

目的

机器学习在临床文档预测结果方面的作用尚不明确。我们旨在比较三种神经网络对住院医生记录进行分析,以预测新生儿缺氧缺血性脑病(HIE)的死亡率。

方法

利用儿童医院新生儿数据库,在单中心识别接受治疗性低温治疗的非异常HIE新生儿。数据与最初七天的文档相关联。通过数据库并应用卷积神经网络和两种循环神经网络得出暴露因素。主要结局为死亡率。确定模型的预测准确性和性能指标。

结果

该队列包括52名符合条件的婴儿。大多数婴儿存活(n = 36,69%),23名患有重度HIE(44%)。神经网络的表现高于基线水平,且在预测死亡率的中位数准确性方面存在差异(P = .0001):长短期记忆循环模型为69%(第25、75百分位数为65、73%),门控循环单元模型为65%(62,69%),卷积神经网络为72%(64,96%)。卷积神经网络的中位数特异性为81%(72,97%)。

结论

神经网络模型在使用住院医生文档预测死亡率方面显示出基本有效性。卷积模型在新生儿HIE死亡率(排除)方面具有高特异性。这些发现为未来的模型训练以及最终的工具开发提供了一个平台,以协助临床医生进行患者评估和风险分层。