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J Am Chem Soc. 2019 Dec 26;141(51):19983-19987. doi: 10.1021/jacs.9b10687. Epub 2019 Dec 16.
3
Structural basis of temperature sensation by the TRP channel TRPV3.TRPV3 型瞬时受体电位通道感受温度的结构基础。
Nat Struct Mol Biol. 2019 Nov;26(11):994-998. doi: 10.1038/s41594-019-0318-7. Epub 2019 Oct 21.
4
Modelling structures in cryo-EM maps.低温电子显微镜图谱中的结构建模。
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5
- automatic molecular dynamics flexible fitting of structural models into cryo-EM and crystallography experimental maps.将结构模型自动进行分子动力学柔性拟合到冷冻电镜和晶体学实验图谱中。
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Integrated NMR and cryo-EM atomic-resolution structure determination of a half-megadalton enzyme complex.利用 NMR 和 cryo-EM 技术实现半兆道尔顿酶复合物的原子分辨率结构测定。
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Protein denaturation at the air-water interface and how to prevent it.蛋白质在气液界面的变性及其预防。
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Automated cryo-EM structure refinement using correlation-driven molecular dynamics.基于相关驱动分子动力学的自动化冷冻电镜结构精修
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Determination of protein structural ensembles using cryo-electron microscopy.使用冷冻电子显微镜测定蛋白质结构集合体。
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在原子分辨率冷冻电镜数据时代,计算建模方法将有何高见?

What Will Computational Modeling Approaches Have to Say in the Era of Atomistic Cryo-EM Data?

机构信息

Department of Bioengineering and Therapeutic Sciences, University of California San Francisco, San Francisco, California 94107, United States.

Structural Biology and NMR Laboratory, Linderstrøm-Lang Centre for Protein Science, Department of Biology, University of Copenhagen, DK-2200 Copenhagen, Denmark.

出版信息

J Chem Inf Model. 2020 May 26;60(5):2410-2412. doi: 10.1021/acs.jcim.0c00123. Epub 2020 Feb 24.

DOI:10.1021/acs.jcim.0c00123
PMID:32090567
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8561786/
Abstract

The focus of this viewpoint is to identify, in the era of atomistic resolution cryo-electron microscopy data, the areas in which computational modelling and molecular simulations will bring valuable contributions to structural biologists and to give an overview of some of the existing efforts in this direction.

摘要

本文观点的重点是,在原子分辨率低温电子显微镜数据时代,确定计算建模和分子模拟将为结构生物学家带来有价值贡献的领域,并概述这一方向的一些现有工作。