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1 型和 2 型糖尿病多基因风险评分的系统评价。

Systematic Review of Polygenic Risk Scores for Type 1 and Type 2 Diabetes.

机构信息

Centre for Bioinformatics and Data Analysis, Medical University of Bialystok, 15-276 Bialystok, Poland.

Clinical Research Centre, Medical University of Bialystok, 15-276 Bialystok, Poland.

出版信息

Int J Mol Sci. 2020 Mar 2;21(5):1703. doi: 10.3390/ijms21051703.

Abstract

Recent studies have led to considerable advances in the identification of genetic variants associated with type 1 and type 2 diabetes. An approach for converting genetic data into a predictive measure of disease susceptibility is to add the risk effects of loci into a polygenic risk score. In order to summarize the recent findings, we conducted a systematic review of studies comparing the accuracy of polygenic risk scores developed during the last two decades. We selected 15 risk scores from three databases (Scopus, Web of Science and PubMed) enrolled in this systematic review. We identified three polygenic risk scores that discriminate between type 1 diabetes patients and healthy people, one that discriminate between type 1 and type 2 diabetes, two that discriminate between type 1 and monogenic diabetes and nine polygenic risk scores that discriminate between type 2 diabetes patients and healthy people. Prediction accuracy of polygenic risk scores was assessed by comparing the area under the curve. The actual benefits, potential obstacles and possible solutions for the implementation of polygenic risk scores in clinical practice were also discussed. Develop strategies to establish the clinical validity of polygenic risk scores by creating a framework for the interpretation of findings and their translation into actual evidence, are the way to demonstrate their utility in medical practice.

摘要

最近的研究在鉴定与 1 型和 2 型糖尿病相关的遗传变异方面取得了相当大的进展。将遗传数据转化为疾病易感性的预测指标的一种方法是将基因座的风险效应添加到多基因风险评分中。为了总结最近的发现,我们对过去二十年中开发的多基因风险评分的准确性进行了系统评价。我们从三个数据库(Scopus、Web of Science 和 PubMed)中选择了 15 个风险评分纳入本系统评价。我们确定了三个可以区分 1 型糖尿病患者和健康人群的多基因风险评分,一个可以区分 1 型和 2 型糖尿病的多基因风险评分,两个可以区分 1 型和单基因糖尿病的多基因风险评分,以及九个可以区分 2 型糖尿病患者和健康人群的多基因风险评分。通过比较曲线下面积来评估多基因风险评分的预测准确性。还讨论了多基因风险评分在临床实践中的实施的实际效益、潜在障碍和可能的解决方案。通过创建一个解释发现及其转化为实际证据的框架,制定策略来建立多基因风险评分的临床有效性,是证明其在医学实践中的实用性的方法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/de2d/7084489/3cf46f6548df/ijms-21-01703-g001.jpg

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