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新种和新种,是从沿海沉积物中分离得到的氢和硫氧化化能自养微生物,对属的描述进行了修订。

sp. nov. and sp. nov., hydrogen- and sulfur-oxidizing chemolithoautotrophs within the isolated from coastal sediments, and an emended description of the genus .

机构信息

Department of Bioengineering and Biotechnology, College of Chemical Engineering, Huaqiao University, Xiamen 361021, PR China.

Fujian Key Laboratory of Marine Genetic Resources, Third Institute of Oceanography, Ministry of Natural Resources of PR China, Xiamen 361005, PR China.

出版信息

Int J Syst Evol Microbiol. 2020 Apr;70(4):2657-2663. doi: 10.1099/ijsem.0.004087. Epub 2020 Mar 5.

Abstract

Strains 1-1N and GYSZ_1 were isolated from marine sediments collected from the coast of Xiamen, PR China. Cells of the two strains were Gram-stain-negative, rod-shaped or slightly curved. Strain 1-1N was non-motile, whereas strain GYSZ_1 was motile by means of one polar flagellum. The temperature, pH and salinity concentration ranges for growth of 1-1N were 10-45 °C (optimum 30 °C), pH 5.5-8.0 (optimum 7.0) and 0-90 g l NaCl (optimum 50 g l), while the growth of GYSZ_1 occurred at 4-45 °C (optimum 33 °C), pH 5.0-8.5 (optimum 6.5) and 5-90 g l NaCl (optimum 20 g l). The two novel isolates were obligate chemolithoautotrophs capable of growth using hydrogen, thiosulfate, sulfide or elemental sulfur as the sole energy source, and nitrate, elemental sulfur or molecular oxygen as an electron acceptor. The major fatty acids of 1-1N were Cω, C, Cω and C, while the predominant fatty acids of strain GYSZ_1 were Cω, C, Cω7 and C 3-OH. The DNA G+C contents of 1-1N and GYSZ_1 were 34.5 mol% and 33.2 mol%, respectively. Phylogenetic analysis based on 16S rRNA gene sequences indicated that 1-1N and GYSZ_1 represented members of the genus , with the highest sequence similarities to SN118 (97.4 %) and DSM 1251 (94.7 %), respectively. However, 1-1N and GYSZ_1 shared 95.5 % similarity of 16S rRNA gene sequences, representing different species of the genus . On the basis of the physiological properties and the results of phylogenetic analyses, including average nucleotide identity and DNA-DNA hybridization values, strains 1-1N and GYSZ_1 represent two novel species within the genus , for which the names sp. nov. and sp. nov. are proposed, with the type strains 1-1N (=MCCC 1A14514=KCTC 15851) and GYSZ_1 (=MCCC 1A14739=KCTC 15853), respectively. Our results also justify an emended description of the genus .

摘要

菌株 1-1N 和 GYSZ_1 从中国厦门沿海采集的海洋沉积物中分离得到。这两种菌株的细胞革兰氏染色阴性,呈杆状或略微弯曲。菌株 1-1N 是非运动的,而菌株 GYSZ_1 则通过一个极生鞭毛运动。1-1N 的生长温度、pH 值和盐度范围为 10-45°C(最佳 30°C),pH 值 5.5-8.0(最佳 7.0)和 0-90 g l NaCl(最佳 50 g l),而 GYSZ_1 的生长发生在 4-45°C(最佳 33°C),pH 值 5.0-8.5(最佳 6.5)和 5-90 g l NaCl(最佳 20 g l)。这两种新的分离物是专性化能自养生物,能够以氢气、硫代硫酸盐、硫化物或元素硫作为唯一的能源,硝酸盐、元素硫或分子氧作为电子受体进行生长。1-1N 的主要脂肪酸为 Cω、C、Cω 和 C,而菌株 GYSZ_1 的主要脂肪酸为 Cω、C、Cω7 和 C 3-OH。1-1N 和 GYSZ_1 的 DNA G+C 含量分别为 34.5 mol%和 33.2 mol%。基于 16S rRNA 基因序列的系统发育分析表明,1-1N 和 GYSZ_1 分别代表属的成员,与 SN118(97.4%)和 DSM 1251(94.7%)的序列相似性最高。然而,1-1N 和 GYSZ_1 的 16S rRNA 基因序列相似度为 95.5%,代表属内的不同种。基于生理特性和系统发育分析的结果,包括平均核苷酸同一性和 DNA-DNA 杂交值,菌株 1-1N 和 GYSZ_1 代表属内的两个新种,建议分别采用新种的名称 sp. nov. 和 sp. nov.,其模式菌株分别为 1-1N(=MCCC 1A14514=KCTC 15851)和 GYSZ_1(=MCCC 1A14739=KCTC 15853)。我们的结果还证实了属的描述需要修正。

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