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sp. nov.,一种从西北印度洋热液硫化物烟囱中分离出的氢和硫氧化化能自养菌。

sp. nov., a hydrogen- and sulfur-oxidizing chemolithoautotroph isolated from a hydrothermal sulfide chimney in the Northwest Indian Ocean.

机构信息

Fujian Key Laboratory of Marine Genetic Resources, Third Institute of Oceanography, Ministry of Natural Resources of PR China, Xiamen 361005, PR China.

Key Laboratory of Marine Genetic Resources, Third Institute of Oceanography, Ministry of Natural Resources of PR China, Xiamen 361005, PR China.

出版信息

Int J Syst Evol Microbiol. 2021 Jan;71(1). doi: 10.1099/ijsem.0.004575. Epub 2020 Dec 2.

Abstract

A novel mesophilic, hydrogen- and sulfur-oxidizing bacterium, designated strain NW8N, was collected from a sulfide chimney at the deep-sea hydrothermal vent on the Carlsberg Ridge of the Northwest Indian Ocean. The cells were Gram-stain-negative, motile, short rods with a single polar flagellum. The temperature, pH and salinity ranges for growth of strain NW8N were 4-40 °C (optimum, 33 °C), pH 4.5-7.5 (optimum, pH 5.5) and 340-680 mM NaCl (optimum, 510 mM). The isolate was an obligate chemolithoautotroph capable of growth using hydrogen, thiosulfate, sulfide or elemental sulphur as the sole energy source, carbon dioxide as the sole carbon source and molecular oxygen as the sole electron acceptor. The major cellular fatty acids of strain NW8N were summed feature 3 (C 7 and/or C 6), C and summed feature 8 (C 7 and/or C 6). The total size of its genome was 2 093 492 bp and the genomic DNA G+C content was 36.9 mol%. Phylogenetic analysis based on 16S rRNA gene sequences and core genes showed that the novel isolate belonged to the genus and was most closely related to GO25 (97.4 % sequence identity). The average nucleotide identity and DNA-DNAhybridization values between strain NW8N and GO25 was 77.8 and 21.1 %, respectively. Based on the phylogenetic, genomic and phenotypic data presented here, strain NW8N represents a novel species of the genus , for which the name sp. nov. is proposed, with the type strain NW8N (=MCCC 1A13988=KTCC 15780).

摘要

一株新型嗜中温、兼性化能自养型、氢营养型和硫营养型的革兰氏阴性、可运动、短杆状细菌,被命名为 NW8N 菌株,从西北印度洋卡尔斯伯格海脊深海热液喷口的硫化物烟囱中采集得到。细胞呈革兰氏阴性,可运动,短杆状,有一根单极鞭毛。NW8N 菌株的最适生长温度、pH 值和盐度范围分别为 4-40°C(最佳生长温度为 33°C)、pH4.5-7.5(最佳生长 pH 值为 5.5)和 340-680 mM NaCl(最佳生长盐度为 510 mM)。该分离株是一种严格的化能自养菌,能够以氢气、硫代硫酸盐、硫化物或元素硫作为唯一能源,二氧化碳作为唯一碳源,分子氧作为唯一电子受体进行生长。NW8N 菌株的主要细胞脂肪酸为 C 7 和/或 C 6 组成的特征脂肪酸 3、C 16:0 和 C 7 和/或 C 6 组成的特征脂肪酸 8。其基因组大小为 2 093 492 bp,基因组 DNA G+C 含量为 36.9 mol%。基于 16S rRNA 基因序列和核心基因的系统发育分析表明,该新分离株属于 属,与 GO25 最为密切相关(序列同一性为 97.4%)。NW8N 菌株与 GO25 之间的平均核苷酸同一性和 DNA-DNA 杂交值分别为 77.8%和 21.1%。基于本文提供的系统发育、基因组和表型数据,NW8N 菌株代表了属的一个新型物种,提议将其命名为 sp. nov.,其模式菌株为 NW8N(=MCCC 1A13988=KTCC 15780)。

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