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传统滤波与基于 U-Net 的模型在 CT 图像肺结节分割中的比较。

Conventional Filtering Versus U-Net Based Models for Pulmonary Nodule Segmentation in CT Images.

机构信息

Faculdade de Engenharia, Universidade do Porto, Rua Dr. Roberto Frias s/n, 4200 - 465, Porto, Portugal.

INESC Technology and Science, Rua Dr. Roberto Frias s/n, 4200 - 465, Porto, Portugal.

出版信息

J Med Syst. 2020 Mar 6;44(4):81. doi: 10.1007/s10916-020-1541-9.

Abstract

Lung cancer is considered one of the deadliest diseases in the world. An early and accurate diagnosis aims to promote the detection and characterization of pulmonary nodules, which is of vital importance to increase the patients' survival rates. The mentioned characterization is done through a segmentation process, facing several challenges due to the diversity in nodular shape, size, and texture, as well as the presence of adjacent structures. This paper tackles pulmonary nodule segmentation in computed tomography scans proposing three distinct methodologies. First, a conventional approach which applies the Sliding Band Filter (SBF) to estimate the filter's support points, matching the border coordinates. The remaining approaches are Deep Learning based, using the U-Net and a novel network called SegU-Net to achieve the same goal. Their performance is compared, as this work aims to identify the most promising tool to improve nodule characterization. All methodologies used 2653 nodules from the LIDC database, achieving a Dice score of 0.663, 0.830, and 0.823 for the SBF, U-Net and SegU-Net respectively. This way, the U-Net based models yield more identical results to the ground truth reference annotated by specialists, thus being a more reliable approach for the proposed exercise. The novel network revealed similar scores to the U-Net, while at the same time reducing computational cost and improving memory efficiency. Consequently, such study may contribute to the possible implementation of this model in a decision support system, assisting the physicians in establishing a reliable diagnosis of lung pathologies based on this segmentation task.

摘要

肺癌被认为是世界上最致命的疾病之一。早期和准确的诊断旨在促进肺结节的检测和特征描述,这对于提高患者的生存率至关重要。所述特征描述是通过分割过程完成的,由于结节形状、大小和纹理的多样性以及相邻结构的存在,该过程面临着许多挑战。本文针对计算机断层扫描中的肺结节分割提出了三种不同的方法。首先,提出了一种传统的方法,该方法应用滑动带滤波器 (SBF) 来估计滤波器的支撑点,以匹配边界坐标。其余的方法是基于深度学习的,使用 U-Net 和一个名为 SegU-Net 的新网络来实现相同的目标。比较了它们的性能,因为这项工作旨在确定最有前途的工具来改善结节特征描述。所有方法都使用了 LIDC 数据库中的 2653 个结节,分别实现了 SBF、U-Net 和 SegU-Net 的 Dice 得分 0.663、0.830 和 0.823。这样,基于 U-Net 的模型产生的结果与专家标注的地面真实参考更一致,因此对于所提出的练习来说是一种更可靠的方法。新网络的得分与 U-Net 相似,同时降低了计算成本并提高了内存效率。因此,这项研究可能有助于在决策支持系统中实现该模型的可能实施,帮助医生基于该分割任务对肺部病变做出可靠的诊断。

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