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自然界中另一种缺失的化能自养代谢途径:硫同价态平衡。

Another chemolithotrophic metabolism missing in nature: sulfur comproportionation.

机构信息

Department of Biological Sciences, University of Southern California, Los Angeles, CA, 90089, USA.

Department of Earth Sciences, University of Southern California, Los Angeles, CA, 90089, USA.

出版信息

Environ Microbiol. 2020 Jun;22(6):1971-1976. doi: 10.1111/1462-2920.14982. Epub 2020 Mar 18.

DOI:10.1111/1462-2920.14982
PMID:32157786
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7384060/
Abstract

Chemotrophic microorganisms gain energy for cellular functions by catalyzing oxidation-reduction (redox) reactions that are out of equilibrium. Calculations of the Gibbs energy ( ΔG ) can identify whether a reaction is thermodynamically favourable and quantify the accompanying energy yield at the temperature, pressure and chemical composition in the system of interest. Based on carefully calculated values of ΔG , we predict a novel microbial metabolism - sulfur comproportionation (3H S + + 2H ⇌ 4S + 4H O). We show that at elevated concentrations of sulfide and sulfate in acidic environments over a broad temperature range, this putative metabolism can be exergonic ( ΔG <0), yielding ~30-50 kJ mol . We suggest that this may be sufficient energy to support a chemolithotrophic metabolism currently missing from the literature. Other versions of this metabolism, comproportionation to thiosulfate (H S + ⇌ + H O) and to sulfite (H S + 3 ⇌ 4 + 2H ), are only moderately exergonic or endergonic even at ideal geochemical conditions. Natural and impacted environments, including sulfidic karst systems, shallow-sea hydrothermal vents, sites of acid mine drainage, and acid-sulfate crater lakes, may be ideal hunting grounds for finding microbial sulfur comproportionators.

摘要

化能微生物通过催化非平衡氧化还原(redox)反应来获取细胞功能所需的能量。吉布斯自由能(ΔG)的计算可以确定反应是否在热力学上有利,并量化在感兴趣的系统中的温度、压力和化学成分下伴随的能量产量。基于精心计算的 ΔG 值,我们预测了一种新的微生物代谢途径——硫歧化作用(3H2S + 2H ⇌ 4S + 4H2O)。我们表明,在酸性环境中,当硫化物和硫酸盐浓度升高且温度范围广泛时,这种假定的代谢途径可以是放能的(ΔG <0),产生约 30-50 kJ/mol。我们认为,这可能足以支持目前文献中缺失的化学生物代谢。这种代谢的其他版本,即歧化作用到硫代硫酸盐(H2S + ⇌ S2O32- + H2O)和亚硫酸盐(H2S + 3 ⇌ 4SO42- + 2H),即使在理想的地球化学条件下,也只是中度放能或吸能。自然和受影响的环境,包括硫化岩溶系统、浅海热液喷口、酸性矿山排水和酸性硫酸盐火山口湖,可能是寻找微生物硫歧化剂的理想场所。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62ba/7384060/b4a8fc2f311c/EMI-22-1971-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62ba/7384060/77680d5040ce/EMI-22-1971-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62ba/7384060/b4a8fc2f311c/EMI-22-1971-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62ba/7384060/77680d5040ce/EMI-22-1971-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62ba/7384060/b4a8fc2f311c/EMI-22-1971-g002.jpg

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本文引用的文献

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Geochem Trans. 2004 Jun 30;5(2):13. doi: 10.1186/1467-4866-5-13. eCollection 2004.
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Minireview: demystifying microbial reaction energetics.微型综述:揭开微生物反应能量学的神秘面纱。
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Complete nitrification: insights into the ecophysiology of comammox Nitrospira.完全硝化作用:comammox Nitrospira 的生态生理学见解。
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The Energetic Potential for Undiscovered Manganese Metabolisms in Nature.自然界中未被发现的锰代谢的能量潜力。
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Mechanisms of Mineral Substrate Acquisition in a Thermoacidophile.嗜热嗜酸菌中矿物质基质获取的机制
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