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油脂截留器:揭示脂肪酶疏水盖的作用机制。

The grease trap: uncovering the mechanism of the hydrophobic lid in lipase.

机构信息

College of Pharmacy,Woosuk University, Wanju 55338, Republic of Korea; Research Institute of Pharmaceutical Sciences, College of Pharmacy, Seoul National University, Gwanak-gu, Seoul 151-742, Republic of Korea.

Research Institute of Pharmaceutical Sciences, College of Pharmacy, Seoul National University, Gwanak-gu, Seoul 151-742, Republic of Korea.

出版信息

J Lipid Res. 2020 May;61(5):722-733. doi: 10.1194/jlr.RA119000279. Epub 2020 Mar 12.

Abstract

Acne is one of the most common dermatological conditions, but the details of its pathology are unclear, and current management regimens often have adverse effects. is known as a major acne-associated bacterium that derives energy from lipase-mediated sebum lipid degradation. is commensal, but lipase activity has been observed to differ among types. For example, higher populations of the type IA strains are present in acne lesions with higher lipase activity. In the present study, we examined a conserved lipase in types IB and II that was truncated in type IA strains. Closed, blocked, and open structures of ATCC11828 lipases were elucidated by X-ray crystallography at 1.6-2.4 Å. The closed crystal structure, which is the most common form in aqueous solution, revealed that a hydrophobic lid domain shields the active site. By comparing closed, blocked, and open structures, we found that the lid domain-opening mechanisms of lipases (lipases) involve the lid-opening residues, Phe-179 and Phe-211. To the best of our knowledge, this is the first structure-function study of lipases, which may help to shed light on the mechanisms involved in acne development and may aid in future drug design.

摘要

痤疮是最常见的皮肤病之一,但其发病机制的细节尚不清楚,目前的治疗方案往往有不良反应。 是一种主要的痤疮相关细菌,它从脂肪酶介导的皮脂脂质降解中获取能量。 是共生菌,但已观察到脂肪酶活性在不同 型之间存在差异。例如,在具有更高脂肪酶活性的痤疮病变中,IA 型菌株的种群更高。在本研究中,我们研究了 IB 和 II 型中保守的脂肪酶,该脂肪酶在 IA 型 菌株中被截断。通过 X 射线晶体学在 1.6-2.4 Å处阐明了 ATCC11828 脂肪酶的封闭、阻塞和开放结构。最常见的水溶液形式的封闭晶体结构表明,一个疏水性盖结构域可以屏蔽活性位点。通过比较封闭、阻塞和开放结构,我们发现脂肪酶(脂肪酶)的盖结构域开启机制涉及盖开启残基 Phe-179 和 Phe-211。据我们所知,这是首次对脂肪酶的结构-功能进行研究,这可能有助于阐明痤疮发展的机制,并可能有助于未来的药物设计。

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