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拟南芥的三维核组织。

Three-dimensional nuclear organization in Arabidopsis thaliana.

机构信息

UPVD, LGDP, UMR5096, Université de Perpignan, Perpignan, France.

CNRS, LGDP, UMR5096, Université de Perpignan, Perpignan, France.

出版信息

J Plant Res. 2020 Jul;133(4):479-488. doi: 10.1007/s10265-020-01185-0. Epub 2020 Apr 2.

DOI:10.1007/s10265-020-01185-0
PMID:32240449
Abstract

In recent years, the study of plant three-dimensional nuclear architecture received increasing attention. Enabled by technological advances, our knowledge on nuclear architecture has greatly increased and we can now access large data sets describing its manifold aspects. The principles of nuclear organization in plants do not significantly differ from those in animals. Plant nuclear organization comprises various scales, ranging from gene loops to topologically associating domains to nuclear compartmentalization. However, whether plant three-dimensional chromosomal features also exert similar functions as in animals is less clear. This review discusses recent advances in the fields of three-dimensional chromosome folding and nuclear compartmentalization and describes a novel silencing mechanism, which is closely linked to nuclear architecture.

摘要

近年来,植物三维核构象的研究受到了越来越多的关注。随着技术的进步,我们对核构象的认识有了很大的提高,现在我们可以获得描述其多方面的大量数据集。植物中核组织的原则与动物的没有显著差异。植物的核组织包括各种尺度,从基因环到拓扑关联域到核区室化。然而,植物三维染色体特征是否也具有与动物相似的功能尚不清楚。这篇综述讨论了三维染色体折叠和核区室化领域的最新进展,并描述了一种与核构象密切相关的新型沉默机制。

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Ribosome Biogenesis in Plants: From Functional 45S Ribosomal DNA Organization to Ribosome Assembly Factors.植物核糖体生物发生:从功能性 45S 核糖体 DNA 组织到核糖体组装因子。
Plant Cell. 2019 Sep;31(9):1945-1967. doi: 10.1105/tpc.18.00874. Epub 2019 Jun 25.
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Chromatin interaction maps reveal genetic regulation for quantitative traits in maize.
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Plant Cell Rep. 2024 Sep 16;43(10):232. doi: 10.1007/s00299-024-03322-8.
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Unique territorial and compartmental organization of chromosomes in the holocentric silkmoth.全着丝粒家蚕染色体独特的区域和分区组织
Res Sq. 2024 Jul 31:rs.3.rs-4732646. doi: 10.21203/rs.3.rs-4732646/v1.
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Evolutional heterochromatin condensation delineates chromocenter formation and retrotransposon silencing in plants.进化中的异染色质凝聚勾勒出植物的染色中心形成和反转录转座子沉默。
Nat Plants. 2024 Aug;10(8):1215-1230. doi: 10.1038/s41477-024-01746-4. Epub 2024 Jul 16.
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Understanding 3D Genome Organization and Its Effect on Transcriptional Gene Regulation Under Environmental Stress in Plant: A Chromatin Perspective.从染色质角度理解植物在环境胁迫下的三维基因组组织及其对转录基因调控的影响
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Plant 3D Chromatin Organization: Important Insights from Chromosome Conformation Capture Analyses of the Last 10 Years.植物三维染色质组织:过去 10 年染色体构象捕获分析的重要见解。
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