• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

浮游植物中大分子分配、元素化学计量学和生长速率的机理模型

A Mechanistic Model of Macromolecular Allocation, Elemental Stoichiometry, and Growth Rate in Phytoplankton.

作者信息

Inomura Keisuke, Omta Anne Willem, Talmy David, Bragg Jason, Deutsch Curtis, Follows Michael J

机构信息

School of Oceanography, University of Washington, Seattle, WA, United States.

Department of Earth, Atmospheric and Planetary Sciences, Massachusetts Institute of Technology, Cambridge, MA, United States.

出版信息

Front Microbiol. 2020 Feb 28;11:86. doi: 10.3389/fmicb.2020.00086. eCollection 2020.

DOI:10.3389/fmicb.2020.00086
PMID:32256456
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7093025/
Abstract

We present a model of the growth rate and elemental stoichiometry of phytoplankton as a function of resource allocation between and within broad macromolecular pools under a variety of resource supply conditions. The model is based on four, empirically-supported, cornerstone assumptions: that there is a saturating relationship between light and photosynthesis, a linear relationship between RNA/protein and growth rate, a linear relationship between biosynthetic proteins and growth rate, and a constant macromolecular composition of the light-harvesting machinery. We combine these assumptions with statements of conservation of carbon, nitrogen, phosphorus, and energy. The model can be solved algebraically for steady state conditions and constrained with data on elemental stoichiometry from published laboratory chemostat studies. It interprets the relationships between macromolecular and elemental stoichiometry and also provides quantitative predictions of the maximum growth rate at given light intensity and nutrient supply rates. The model is compatible with data sets from several laboratory studies characterizing both prokaryotic and eukaryotic phytoplankton from marine and freshwater environments. It is conceptually simple, yet mechanistic and quantitative. Here, the model is constrained only by elemental stoichiometry, but makes predictions about allocation to measurable macromolecular pools, which could be tested in the laboratory.

摘要

我们提出了一个浮游植物生长速率和元素化学计量学的模型,该模型是在各种资源供应条件下,作为大分子库之间和内部资源分配的函数。该模型基于四个得到实验支持的基石假设:光与光合作用之间存在饱和关系、RNA/蛋白质与生长速率之间存在线性关系、生物合成蛋白质与生长速率之间存在线性关系,以及光捕获机制的大分子组成恒定。我们将这些假设与碳、氮、磷和能量守恒的表述相结合。该模型可以通过代数方法求解稳态条件,并根据已发表的实验室恒化器研究中的元素化学计量学数据进行约束。它解释了大分子和元素化学计量学之间的关系,还提供了给定光强度和养分供应速率下最大生长速率的定量预测。该模型与来自多项实验室研究的数据集兼容,这些研究对来自海洋和淡水环境的原核和真核浮游植物进行了表征。它在概念上很简单,但具有机械性和定量性。在这里,该模型仅受元素化学计量学的约束,但对可测量的大分子库的分配进行了预测,这些预测可以在实验室中进行测试。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97ef/7093025/3247e86c4b20/fmicb-11-00086-g0011.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97ef/7093025/186d15546929/fmicb-11-00086-g0009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97ef/7093025/89f51c1ae6e2/fmicb-11-00086-g0010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97ef/7093025/3247e86c4b20/fmicb-11-00086-g0011.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97ef/7093025/186d15546929/fmicb-11-00086-g0009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97ef/7093025/89f51c1ae6e2/fmicb-11-00086-g0010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97ef/7093025/3247e86c4b20/fmicb-11-00086-g0011.jpg

相似文献

1
A Mechanistic Model of Macromolecular Allocation, Elemental Stoichiometry, and Growth Rate in Phytoplankton.浮游植物中大分子分配、元素化学计量学和生长速率的机理模型
Front Microbiol. 2020 Feb 28;11:86. doi: 10.3389/fmicb.2020.00086. eCollection 2020.
2
Interactions between growth-dependent changes in cell size, nutrient supply and cellular elemental stoichiometry of marine Synechococcus.海洋聚球藻细胞大小的生长依赖性变化、营养供应与细胞元素化学计量之间的相互作用
ISME J. 2016 Nov;10(11):2715-2724. doi: 10.1038/ismej.2016.50. Epub 2016 Apr 8.
3
Saturating relationship between phytoplankton growth rate and nutrient concentration explained by macromolecular allocation.浮游植物生长速率与营养浓度之间的饱和关系由大分子分配解释。
Curr Res Microb Sci. 2022 Sep 21;3:100167. doi: 10.1016/j.crmicr.2022.100167. eCollection 2022.
4
Corrigendum: A mechanistic model of macromolecular allocation, elemental stoichiometry, and growth rate in phytoplankton.勘误:浮游植物中大分子分配、元素化学计量和生长速率的机理模型。
Front Microbiol. 2024 Oct 18;15:1486795. doi: 10.3389/fmicb.2024.1486795. eCollection 2024.
5
Elemental and macromolecular plasticity of Chlamydomonas reinhardtii (Chlorophyta) in response to resource limitation and growth rate.莱茵衣藻(绿藻门)对资源限制和生长速率的元素和高分子可塑性。
J Phycol. 2024 Apr;60(2):418-431. doi: 10.1111/jpy.13417. Epub 2024 Jan 10.
6
Modeled temperature dependencies of macromolecular allocation and elemental stoichiometry in phytoplankton.浮游植物中大分子分配和元素化学计量的模拟温度依赖性。
Comput Struct Biotechnol J. 2021 Sep 28;19:5421-5427. doi: 10.1016/j.csbj.2021.09.028. eCollection 2021.
7
Carbon allocation under light and nitrogen resource gradients in two model marine phytoplankton(1).两种典型海洋浮游植物在光照和氮资源梯度下的碳分配(1)
J Phycol. 2013 Jun;49(3):523-35. doi: 10.1111/jpy.12060. Epub 2013 Mar 28.
8
High Variability in Cellular Stoichiometry of Carbon, Nitrogen, and Phosphorus Within Classes of Marine Eukaryotic Phytoplankton Under Sufficient Nutrient Conditions.在营养充足条件下,海洋真核浮游植物类群中碳、氮和磷的细胞化学计量具有高度变异性。
Front Microbiol. 2018 Mar 27;9:543. doi: 10.3389/fmicb.2018.00543. eCollection 2018.
9
A model of time-dependent macromolecular and elemental composition of phytoplankton.浮游植物随时间变化的大分子和元素组成模型。
J Theor Biol. 2024 Sep 7;592:111883. doi: 10.1016/j.jtbi.2024.111883. Epub 2024 Jun 20.
10
Elemental stoichiometry of the key calcifying marine phytoplankton Emiliania huxleyi under ocean climate change: A meta-analysis.海洋气候变化下关键钙化海洋浮游植物颗石藻的元素化学计量:一项荟萃分析。
Glob Chang Biol. 2023 Aug;29(15):4259-4278. doi: 10.1111/gcb.16807. Epub 2023 Jun 6.

引用本文的文献

1
Biophysical and molecular mechanisms responsible for phytoplankton sinking in response to starvation.浮游植物因饥饿而沉降的生物物理和分子机制。
bioRxiv. 2025 May 5:2025.05.04.652135. doi: 10.1101/2025.05.04.652135.
2
Nitrogen and phosphorus differentially control marine biomass production and stoichiometry.氮和磷对海洋生物量的生产和化学计量有着不同的控制作用。
Nat Commun. 2025 Jul 1;16(1):5713. doi: 10.1038/s41467-025-61061-0.
3
Latitudinal patterns in ocean C:N:P reflect phytoplankton acclimation and macromolecular composition.

本文引用的文献

1
Optimal proteome allocation strategies for phototrophic growth in a light-limited chemostat.在光照受限的恒化器中进行光养生长的最优蛋白质组分配策略。
Microb Cell Fact. 2019 Oct 10;18(1):165. doi: 10.1186/s12934-019-1209-7.
2
The Macromolecular Basis of Phytoplankton C:N:P Under Nitrogen Starvation.氮饥饿状态下浮游植物碳氮磷的大分子基础
Front Microbiol. 2019 Apr 17;10:763. doi: 10.3389/fmicb.2019.00763. eCollection 2019.
3
Quantitative macromolecular patterns in phytoplankton communities resolved at the taxonomical level by single-cell Synchrotron FTIR-spectroscopy.
海洋 C:N:P 的纬度分布反映了浮游植物的驯化和高分子组成。
Proc Natl Acad Sci U S A. 2024 Nov 12;121(46):e2404460121. doi: 10.1073/pnas.2404460121. Epub 2024 Nov 5.
4
Coexistence of Dominant Marine Phytoplankton Sustained by Nutrient Specialization.优势海洋浮游植物共存是由营养特化维持的。
Microbiol Spectr. 2023 Aug 17;11(4):e0400022. doi: 10.1128/spectrum.04000-22. Epub 2023 Jul 17.
5
Global patterns in marine organic matter stoichiometry driven by phytoplankton ecophysiology.由浮游植物生态生理学驱动的海洋有机物质化学计量的全球模式。
Nat Geosci. 2022;15(12):1034-1040. doi: 10.1038/s41561-022-01066-2. Epub 2022 Nov 21.
6
Saturating relationship between phytoplankton growth rate and nutrient concentration explained by macromolecular allocation.浮游植物生长速率与营养浓度之间的饱和关系由大分子分配解释。
Curr Res Microb Sci. 2022 Sep 21;3:100167. doi: 10.1016/j.crmicr.2022.100167. eCollection 2022.
7
Modeling the elemental stoichiometry and silicon accumulation in diatoms.硅藻中元素化学计量学和硅积累的建模。
Curr Res Microb Sci. 2022 Sep 20;3:100164. doi: 10.1016/j.crmicr.2022.100164. eCollection 2022.
8
The balance between photosynthesis and respiration explains the niche differentiation between and .光合作用与呼吸作用之间的平衡解释了[具体两者]之间的生态位分化。 (原文中“and”前后内容缺失,这里按字面翻译,需根据完整原文准确理解)
Comput Struct Biotechnol J. 2022 Nov 17;21:58-65. doi: 10.1016/j.csbj.2022.11.029. eCollection 2023.
9
Single-cell measurements and modelling reveal substantial organic carbon acquisition by Prochlorococcus.单细胞测量和建模揭示聚球藻大量获取有机碳。
Nat Microbiol. 2022 Dec;7(12):2068-2077. doi: 10.1038/s41564-022-01250-5. Epub 2022 Nov 3.
10
The ongoing need for rates: can physiology and omics come together to co-design the measurements needed to understand complex ocean biogeochemistry?对速率的持续需求:生理学和组学能否结合起来共同设计理解复杂海洋生物地球化学所需的测量方法?
J Plankton Res. 2022 Jun 8;44(4):485-495. doi: 10.1093/plankt/fbac026. eCollection 2022 Jul-Aug.
利用单细胞同步辐射傅里叶变换红外光谱技术在分类学水平上解析浮游植物群落中的定量高分子模式。
BMC Plant Biol. 2019 Apr 15;19(1):142. doi: 10.1186/s12870-019-1736-8.
4
Quantitative insights into the cyanobacterial cell economy.定量洞察蓝藻细胞经济。
Elife. 2019 Feb 4;8:e42508. doi: 10.7554/eLife.42508.
5
A quantitative model of nitrogen fixation in the presence of ammonium.存在铵的情况下的固氮定量模型。
PLoS One. 2018 Nov 29;13(11):e0208282. doi: 10.1371/journal.pone.0208282. eCollection 2018.
6
Effect of phytoplankton size diversity on primary productivity in the North Pacific: trait distributions under environmental variability.浮游植物大小多样性对北太平洋初级生产力的影响:环境变异性下的性状分布。
Ecol Lett. 2019 Jan;22(1):56-66. doi: 10.1111/ele.13167. Epub 2018 Oct 17.
7
Growth of Cyanobacteria Is Constrained by the Abundance of Light and Carbon Assimilation Proteins.蓝藻的生长受到光和碳同化蛋白丰度的限制。
Cell Rep. 2018 Oct 9;25(2):478-486.e8. doi: 10.1016/j.celrep.2018.09.040.
8
A model of optimal protein allocation during phototrophic growth.光合营养生长过程中最佳蛋白质分配模型。
Biosystems. 2018 Apr;166:26-36. doi: 10.1016/j.biosystems.2018.02.004. Epub 2018 Feb 21.
9
Ocean biogeochemistry modeled with emergent trait-based genomics.运用新兴基于特征的基因组学对海洋生物地球化学进行建模。
Science. 2017 Dec 1;358(6367):1149-1154. doi: 10.1126/science.aan5712.
10
Ecological Stoichiometry of Ocean Plankton.海洋浮游生物的生态化学计量学。
Ann Rev Mar Sci. 2018 Jan 3;10:43-69. doi: 10.1146/annurev-marine-121916-063126. Epub 2017 Aug 30.