Lin Xiaomei, Zhou Caijin, Zhu Songbiao, Deng Haiteng, Zhang Jisong, Lu Yuan
Key Laboratory of Industrial Biocatalysis, Ministry of Education, Department of Chemical Engineering, Tsinghua University, Beijing, China.
The State Key Lab of Chemical Engineering, Department of Chemical Engineering, Tsinghua University, Beijing, China.
Front Bioeng Biotechnol. 2020 Apr 9;8:312. doi: 10.3389/fbioe.2020.00312. eCollection 2020.
Involved in most aerobic biochemical processes, oxygen affects cellular functions, and organism behaviors. Protein synthesis, as the underlying biological process, is unavoidably affected by the regulation of oxygen delivery and utilization. Bypassing the cell wall, cell-free protein synthesis (CFPS) systems are well adopted for the precise oxygen regulation analysis of bioprocesses. Here a reliable flow platform was developed for measuring and analyzing the oxygen regulation on the protein synthesis processes by combining -based CFPS systems and a tube-in-tube reactor. This platform allows protein synthesis reactions conducted in precisely controlled oxygen concentrations. For analysis of the intrinsic role of oxygen in protein synthesis, O-tuned CFPS systems were explored with transcription-translation related parameters (transcripts, energy, reactive oxygen species, and proteomic pathway analysis). It was found that 2% of oxygen was the minimum requirement for protein synthesis. There was translation-related protein degradation in the high oxygen condition leading to a reduction. By combining the precise gas level controlling and open biosystems, this platform is also potential for fundamental understanding and clinical applications by diverse gas regulation in biological processes.
氧气参与大多数需氧生物化学过程,影响细胞功能和生物体行为。蛋白质合成作为基本的生物学过程,不可避免地受到氧气输送和利用调节的影响。无细胞蛋白质合成(CFPS)系统绕过细胞壁,被广泛用于生物过程的精确氧气调节分析。在此,通过结合基于的CFPS系统和管中管反应器,开发了一个可靠的流动平台,用于测量和分析蛋白质合成过程中的氧气调节。该平台允许在精确控制的氧气浓度下进行蛋白质合成反应。为了分析氧气在蛋白质合成中的内在作用,利用转录-翻译相关参数(转录本、能量、活性氧和蛋白质组学途径分析)探索了氧气调节的CFPS系统。结果发现,2%的氧气是蛋白质合成的最低需求。在高氧条件下存在与翻译相关的蛋白质降解,导致合成减少。通过结合精确的气体水平控制和开放生物系统,该平台还具有通过生物过程中的多种气体调节实现基础理解和临床应用的潜力。