Shahinpei Azadeh, Amoozegar Mohammad Ali, Mirfeizi Leila, Nikou Mahdi Moshtaghi, Ventosa Antonio, Sánchez-Porro Cristina
Extremophiles Laboratory, Department of Microbiology, Faculty of Biology and Center of Excellence in Phylogeny of Living Organisms, College of Science, University of Tehran, 1417414418 Tehran, Iran.
Microorganisms Bank, Iranian Biological Resource Centre (IBRC), ACECR, 1551916111 Tehran, Iran.
Microorganisms. 2020 Apr 23;8(4):610. doi: 10.3390/microorganisms8040610.
The genus belongs to the phylum and includes eight species. Our study, based on the genomic parameters in silico DNA-DNA hybridization (GGDC), average nucleotide identity (OrthoANI), and average amino acid identity (AAI), confirmed that all current species of belong to this genus and constitute a coherent phylogenomic group, but with species forming two separate branches. In addition, the genome-based analyses revealed that and are members of the same species. Besides, we carried out a taxonomic characterization of the new strain GBPx2, isolated from the halophytic plant sp. Analysis of its 16S rRNA gene sequence showed the highest sequence similarity (97.5%) to HY9. Percentages of GGDC and OrthoANI between strain GBPx2 and species of the genus were lower than the threshold value for species delineation. The DNA G+C content was 43.0 mol%. The polar lipids included phosphatidylethanolamine as well as one unidentified phospholipid and four unidentified lipids, and its major cellular fatty acids were iso-C and summed feature 3 (C and/or iso-C 2-OH). The only quinone present was menaquinone 7. Based on a combination of phenotypic, chemotaxonomic, and phylogenomic features, the GBPx2 strain represents a novel species of the genus , for which the name sp. nov. is proposed. The type strain of is GBPx2 (= IBRC-M 10634 = LMG 28551).
该属属于 门,包含八个物种。我们基于电子DNA - DNA杂交(GGDC)、平均核苷酸同一性(OrthoANI)和平均氨基酸同一性(AAI)等基因组参数进行的研究证实,当前所有的 物种均属于该属,并构成一个连贯的系统发育基因组群,但物种形成了两个独立的分支。此外,基于基因组的分析表明 和 是同一物种的成员。此外,我们对从盐生植物 sp. 分离出的新菌株GBPx2进行了分类学表征。对其16S rRNA基因序列的分析显示,与 HY9的序列相似性最高(97.5%)。菌株GBPx2与 属物种之间的GGDC和OrthoANI百分比低于物种界定的阈值。DNA G + C含量为43.0 mol%。极性脂质包括磷脂酰乙醇胺以及一种未鉴定的磷脂和四种未鉴定的脂质,其主要细胞脂肪酸为异-C 和总和特征3(C 和/或异-C 2-OH)。唯一存在的醌是甲基萘醌7。基于表型、化学分类学和系统发育基因组学特征的组合,GBPx2菌株代表了 属的一个新物种,为此提出名称 sp. nov.。 的模式菌株是GBPx2(= IBRC - M 10634 = LMG 28551)。