Applied Plant & Soil Biology, Plant Biology and Soil Science Department, Biology Faculty, University of Vigo, E-36310 Vigo, Spain.
CITACA-Agri-Food Research and Transfer Cluster, University of Vigo, E-32004 Ourense, Spain.
Biomolecules. 2020 May 11;10(5):746. doi: 10.3390/biom10050746.
Organogenesis constitutes the biological feature driving plant in vitro regeneration, in which the role of plant hormones is crucial. The use of machine learning (ML) technology stands out as a novel approach to characterize the combined role of two phytohormones, the auxin indoleacetic acid (IAA) and the cytokinin 6-benzylaminopurine (BAP), on the in vitro organogenesis of unexploited medicinal plants from the subgenus. The predictive model generated by neurofuzzy logic, a combination of artificial neural networks (ANNs) and fuzzy logic algorithms, was able to reveal the critical factors affecting such multifactorial process over the experimental dataset collected. The rules obtained along with the model allowed to decipher that BAP had a pleiotropic effect on the spp., as it caused different organogenetic responses depending on its concentration and the genotype, including direct and indirect shoot organogenesis and callus formation. On the contrary, IAA showed an inhibiting role, restricted to indirect shoot regeneration. In this work, neurofuzzy logic emerged as a cutting-edge method to characterize the mechanism of action of two phytohormones, leading to the optimization of plant tissue culture protocols with high large-scale biotechnological applicability.
器官发生是驱动植物离体再生的生物学特征,其中植物激素的作用至关重要。机器学习 (ML) 技术的应用是一种新颖的方法,可以描述两种植物激素——生长素吲哚乙酸 (IAA) 和细胞分裂素 6-苄氨基嘌呤 (BAP)——在未开发药用植物亚属离体器官发生中的联合作用。神经模糊逻辑生成的预测模型是人工神经网络 (ANNs) 和模糊逻辑算法的组合,能够揭示在收集的实验数据集上影响这种多因素过程的关键因素。获得的规则和模型允许破译 BAP 对 spp. 具有多效性作用,因为它根据其浓度和基因型引起不同的器官发生反应,包括直接和间接的芽器官发生和愈伤组织形成。相反,IAA 表现出抑制作用,仅限于间接的芽再生。在这项工作中,神经模糊逻辑成为一种描述两种植物激素作用机制的前沿方法,从而优化了具有高通量生物技术应用的植物组织培养方案。