Department of EEE, BUET, ECE Building, West Palashi, Dhaka 1205, Bangladesh.
Comput Biol Med. 2020 Jul;122:103869. doi: 10.1016/j.compbiomed.2020.103869. Epub 2020 Jun 20.
With the recent outbreak of COVID-19, fast diagnostic testing has become one of the major challenges due to the critical shortage of test kit. Pneumonia, a major effect of COVID-19, needs to be urgently diagnosed along with its underlying reasons. In this paper, deep learning aided automated COVID-19 and other pneumonia detection schemes are proposed utilizing a small amount of COVID-19 chest X-rays. A deep convolutional neural network (CNN) based architecture, named as CovXNet, is proposed that utilizes depthwise convolution with varying dilation rates for efficiently extracting diversified features from chest X-rays. Since the chest X-ray images corresponding to COVID-19 caused pneumonia and other traditional pneumonias have significant similarities, at first, a large number of chest X-rays corresponding to normal and (viral/bacterial) pneumonia patients are used to train the proposed CovXNet. Learning of this initial training phase is transferred with some additional fine-tuning layers that are further trained with a smaller number of chest X-rays corresponding to COVID-19 and other pneumonia patients. In the proposed method, different forms of CovXNets are designed and trained with X-ray images of various resolutions and for further optimization of their predictions, a stacking algorithm is employed. Finally, a gradient-based discriminative localization is integrated to distinguish the abnormal regions of X-ray images referring to different types of pneumonia. Extensive experimentations using two different datasets provide very satisfactory detection performance with accuracy of 97.4% for COVID/Normal, 96.9% for COVID/Viral pneumonia, 94.7% for COVID/Bacterial pneumonia, and 90.2% for multiclass COVID/normal/Viral/Bacterial pneumonias. Hence, the proposed schemes can serve as an efficient tool in the current state of COVID-19 pandemic. All the architectures are made publicly available at: https://github.com/Perceptron21/CovXNet.
随着 COVID-19 的爆发,由于检测试剂盒的严重短缺,快速诊断测试已成为主要挑战之一。COVID-19 的主要影响是肺炎,需要紧急诊断并确定其根本原因。在本文中,提出了利用少量 COVID-19 胸部 X 射线的深度学习辅助自动化 COVID-19 和其他肺炎检测方案。提出了一种名为 CovXNet 的基于深度卷积神经网络(CNN)的架构,该架构利用具有不同扩张率的深度卷积,从胸部 X 射线中高效提取多样化的特征。由于 COVID-19 引起的肺炎和其他传统肺炎的胸部 X 射线图像有很大的相似性,因此首先使用大量对应于正常和(病毒/细菌)肺炎患者的胸部 X 射线来训练所提出的 CovXNet。该初始训练阶段的学习是通过一些额外的微调层来转移的,这些微调层是用少量对应于 COVID-19 和其他肺炎患者的胸部 X 射线进一步训练的。在提出的方法中,设计并训练了不同形式的 CovXNets,使用了各种分辨率的 X 射线图像,并为了进一步优化其预测,采用了堆叠算法。最后,集成了基于梯度的判别定位,以区分对应于不同类型肺炎的 X 射线图像的异常区域。使用两个不同数据集进行的广泛实验提供了非常令人满意的检测性能,对于 COVID/正常的准确率为 97.4%,对于 COVID/病毒性肺炎的准确率为 96.9%,对于 COVID/细菌性肺炎的准确率为 94.7%,对于多类 COVID/正常/病毒性/细菌性肺炎的准确率为 90.2%。因此,所提出的方案可以在当前 COVID-19 大流行的情况下作为一种有效的工具。所有的架构都可以在 https://github.com/Perceptron21/CovXNet 上获得。