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非治疗性斑块状银屑病患者按疾病严重程度分层的肠道微生物组学分析:银屑病微生物组指数的建立。

Metagenomic analysis of gut microbiota in non-treated plaque psoriasis patients stratified by disease severity: development of a new Psoriasis-Microbiome Index.

机构信息

Hospital Interzonal General de Agudos Presidente Perón, Servicio de Dermatología, Avellaneda, Argentina.

Psoriasis BsAs, Buenos Aires, Argentina.

出版信息

Sci Rep. 2020 Jul 29;10(1):12754. doi: 10.1038/s41598-020-69537-3.

DOI:10.1038/s41598-020-69537-3
PMID:32728075
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7391695/
Abstract

Psoriasis is an immune-mediated skin disorder. Imbalance of gut microbial populations has been implicated in many diseases. We aimed to investigate whether there were differences in gut microbiota in psoriasis patients vs non-psoriasis controls and between psoriasis severity groups. 55 psoriasis patients and 27 controls were included. V3-V4 regions of the 16S rRNA gene of fecal samples were analyzed using Illumina MiSeq. Bioinformatic analysis was performed. We found changes in gut microbiome composition depending on their psoriasis status as determined by weighted unifrac (p < 0.05), in particular an increase in Firmicutes and depletion of Bacteroidetes in psoriasis patients. Additionally, the Faecalibacterium and Blautia genus were higher in psoriasis patients while Bacteroides and Paraprevotella in non-psoriasis controls (p < 0.05, LDA score > 2). Moderate-to-severe psoriasis patients had lower biodiversity than mild psoriatic patients (p = 0.049). No differences for beta-diversity were found. We developed a Psoriasis-Microbiota Index (PMI), which discriminated among psoriasis patients and controls with sensitivity: 0.78 and specificity: 0.79. Furthermore, we performed a meta-analysis with published data to validate this index. We demonstrated gut dysbiosis in psoriasis patients, suggesting a role in psoriasis pathophysiology. Furthermore, we developed a PMI with the potential to discriminate between psoriasis patients and controls across different populations, which could be used as a biomarker in the clinical practice.

摘要

银屑病是一种免疫介导的皮肤疾病。肠道微生物种群的失衡与许多疾病有关。我们旨在研究银屑病患者与非银屑病对照组之间以及银屑病严重程度组之间的肠道微生物群是否存在差异。纳入了 55 名银屑病患者和 27 名对照者。使用 Illumina MiSeq 分析粪便样本的 16S rRNA 基因的 V3-V4 区。进行了生物信息学分析。我们发现,根据加权 UniFrac(p<0.05)确定的银屑病状态,肠道微生物组组成发生了变化,特别是在银屑病患者中厚壁菌门增加,拟杆菌门减少。此外,银屑病患者中的粪杆菌属和布劳特氏菌属较高,而非银屑病对照组中的拟杆菌属和副拟杆菌属较高(p<0.05,LDA 评分>2)。中重度银屑病患者的生物多样性低于轻度银屑病患者(p=0.049)。β多样性无差异。我们开发了一种银屑病微生物指数(PMI),可区分银屑病患者和对照者,其敏感性为 0.78,特异性为 0.79。此外,我们进行了一项荟萃分析,以验证该指数。我们证明了银屑病患者的肠道失调,提示其在银屑病发病机制中的作用。此外,我们开发了一种 PMI,具有在不同人群中区分银屑病患者和对照者的潜力,可作为临床实践中的生物标志物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b255/7391695/3ce28d627013/41598_2020_69537_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b255/7391695/ce502f4ccb38/41598_2020_69537_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b255/7391695/2c52d03938b3/41598_2020_69537_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b255/7391695/b16c6ed764de/41598_2020_69537_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b255/7391695/3ce28d627013/41598_2020_69537_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b255/7391695/ce502f4ccb38/41598_2020_69537_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b255/7391695/2c52d03938b3/41598_2020_69537_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b255/7391695/b16c6ed764de/41598_2020_69537_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b255/7391695/3ce28d627013/41598_2020_69537_Fig4_HTML.jpg

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