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中国的 Husavirus Posa 样病毒和一个新的病毒组。

The Husavirus Posa-Like Viruses in China, and a New Group of .

机构信息

WHO WPRO Regional Polio Reference Laboratory and NHC Key Laboratory for Biosafety, NHC Key Laboratory for Medical Virology, National Institute for Viral Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing 102206, China.

Tibet Center for Disease Control and Prevention, Tibet Autonomous Region, Lhasa 850000, China.

出版信息

Viruses. 2020 Sep 7;12(9):995. doi: 10.3390/v12090995.

Abstract

Novel posa-like viral genomes were first identified in swine fecal samples using metagenomics and were designated as unclassified viruses in the order . In the present study, nine husavirus strains were identified in China. Their genomes share 94.1-99.9% similarity, and alignment of these nine husavirus strains identified 697 nucleotide polymorphism sites across their full-length genomes. These nine strains were directly clustered with the Husavirus 1 lineage, and their genomic arrangement showed similar characteristics. These posa-like viruses have undergone a complex evolutionary process, and have a wide geographic distribution, complex host spectrum, deep phylogenetic divergence, and diverse genomic organizations. The clade of posa-like viruses forms a single group, which is evolutionarily distinct from other known families and could represent a distinct family within the . The genomic arrangement of and the new posa-like viruses are different, whereas the posa-like viruses have genomic modules similar to the families Dicistroviridae and Marnaviridae. The present study provides valuable genetic evidence of husaviruses in China, and clarifies the phylogenetic dynamics and the evolutionary characteristics of .

摘要

新型的类似 Posa 的病毒基因组最初是通过宏基因组学在猪粪便样本中发现的,并被指定为未分类病毒目。在本研究中,在中国鉴定了 9 株 Husavirus 株。它们的基因组相似度为 94.1-99.9%,对这 9 株 Husavirus 株的全长基因组进行比对,鉴定出了 697 个核苷酸多态性位点。这 9 个毒株与 Husavirus 1 谱系直接聚类,其基因组排列具有相似的特征。这些类似 Posa 的病毒经历了复杂的进化过程,具有广泛的地理分布、复杂的宿主范围、深的系统发育分歧和多样的基因组组织。Posa 样病毒的分支形成了一个单独的群组,在进化上与其他已知科不同,可能代表了 的一个独特科。和新的类似 Posa 的病毒的基因组排列不同,而类似 Posa 的病毒具有与 Dicistroviridae 和 Marnaviridae 家族相似的基因组模块。本研究为中国 Husavirus 提供了有价值的遗传证据,阐明了 的系统发育动态和进化特征。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/75c3/7551994/004578c3e071/viruses-12-00995-g001.jpg

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