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空肠弯曲菌细胞间染色体编码标记物的水平基因交换。

Horizontal genetic exchange of chromosomally encoded markers between Campylobacter jejuni cells.

机构信息

Department of Poultry Science, University of Arkansas, Fayetteville, AR, United States of America.

Cell and Molecular Biology Program, University of Arkansas, Fayetteville, AR, United States of America.

出版信息

PLoS One. 2020 Oct 26;15(10):e0241058. doi: 10.1371/journal.pone.0241058. eCollection 2020.

Abstract

Many epidemiological studies provide us with the evidence of horizontal gene transfer (HGT) contributing to the bacterial genomic diversity that benefits the bacterial populations with increased ability to adapt to the dynamic environments. Campylobacter jejuni, a major cause of acute enteritis in the U.S., often linked with severe post-infection neuropathies, has been reported to exhibit a non-clonal population structure and comparatively higher strain-level genetic variation. In this study, we provide evidence of the HGT of chromosomally encoded genetic markers between C. jejuni cells in the biphasic MH medium. We used two C. jejuni NCTC-11168 mutants harbouring distinct antibiotic-resistance genes [chloramphenicol (Cm) and kanamycin (Km)] present at two different neutral genomic loci. Cultures of both marker strains were mixed together and incubated for 5 hrs, then plated on MH agar plates supplemented with both antibiotics. The recombinant cells with double antibiotic markers were generated at the frequency of 0.02811 ± 0.0035% of the parental strains. PCR assays using locus-specific primers confirmed that transfer of the antibiotic-resistance genes was through homologous recombination. Also, the addition of chicken cecal content increased the recombination efficiency approximately up to 10-fold as compared to the biphasic MH medium (control) at P < 0.05. Furthermore, treating the co-culture with DNase I decreased the available DNA, which in turn significantly reduced recombination efficiency by 99.92% (P < 0.05). We used the cell-free supernatant of 16 hrs-culture of Wild-type C. jejuni as a template for PCR and found DNA sequences from six different genomic regions were easily amplified, indicating the presence of released chromosomal DNA in the culture supernatant. Our findings suggest that HGT in C. jejuni is facilitated in the chicken gut environment contributing to in vivo genomic diversity. Additionally, C. jejuni might have an active mechanism to release its chromosomal DNA into the extracellular environment, further expediting HGT in C. jejuni populations.

摘要

许多流行病学研究为我们提供了证据,证明水平基因转移(HGT)有助于细菌基因组多样性,使细菌种群具有更强的适应动态环境的能力。空肠弯曲菌是美国急性肠炎的主要病因,常与严重的感染后神经病变有关,据报道其表现出非克隆种群结构和相对较高的菌株水平遗传变异。在这项研究中,我们提供了证据表明,在双相 MH 培养基中,空肠弯曲菌细胞之间存在染色体编码遗传标记的 HGT。我们使用了两种空肠弯曲菌 NCTC-11168 突变体,它们携带两个不同的中性基因组位置上的不同抗生素抗性基因[氯霉素(Cm)和卡那霉素(Km)]。将两种标记菌株的培养物混合在一起,孵育 5 小时,然后在补充两种抗生素的 MH 琼脂平板上进行平板培养。具有双重抗生素标记的重组细胞的生成频率为亲本菌株的 0.02811 ± 0.0035%。使用位点特异性引物的 PCR 分析证实,抗生素抗性基因的转移是通过同源重组发生的。此外,与双相 MH 培养基(对照)相比,鸡盲肠内容物的添加将重组效率提高了约 10 倍(P < 0.05)。此外,用 DNA 酶 I 处理共培养物会降低可用的 DNA,从而使重组效率显著降低 99.92%(P < 0.05)。我们使用 16 小时培养的野生型空肠弯曲菌的无细胞上清液作为模板进行 PCR,发现很容易扩增出来自六个不同基因组区域的 DNA 序列,表明培养上清液中存在释放的染色体 DNA。我们的研究结果表明,空肠弯曲菌中的 HGT 在鸡肠道环境中得到促进,有助于体内基因组多样性。此外,空肠弯曲菌可能有一种将其染色体 DNA 释放到细胞外环境中的主动机制,进一步加速空肠弯曲菌种群中的 HGT。

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