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迈向使用图分析追踪新冠疫情

Towards Using Graph Analytics for Tracking Covid-19.

作者信息

El Mouden Zakariyaa Ait, Taj Rachida Moulay, Jakimi Abdeslam, Hajar Moha

机构信息

Software Engineering & Information Systems Engineering, FST Errachidia, Moulay Ismail University, Meknes, Morocco.

Operational Research & Computer Science, FST Errachidia, Moulay Ismail University, Meknes, Morocco.

出版信息

Procedia Comput Sci. 2020;177:204-211. doi: 10.1016/j.procs.2020.10.029. Epub 2020 Nov 11.

DOI:10.1016/j.procs.2020.10.029
PMID:33200008
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7657018/
Abstract

Graph analytics are now considered the state-of-the-art in many applications of communities detection. The combination between the graph's definition in mathematics and the graphs in computer science as an abstract data structure is the key behind the success of graph-based approaches in machine learning. Based on graphs, several approaches have been developed such as shortest path first (SPF) algorithms, subgraphs extraction, social media analytics, transportation networks, bioinformatic algorithms, etc. While SPF algorithms are widely used in optimization problems, Spectral clustering (SC) algorithms have overcome the limits of the most state-of-art approaches in communities detection. The purpose of this paper is to introduce a graph-based approach of communities detection in the novel coronavirus Covid-19 countries' datasets. The motivation behind this work is to overcome the limitations of multiclass classification, as SC is an unsupervised clustering algorithm, there is no need to predefine the output clusters as a preprocessing step. Our proposed approach is based on a previous contribution on an automatic estimation of the number of the output clusters. Based on dynamic statistical data for more than 200 countries, each cluster is supposed to group countries having similar behaviors of Covid-19 propagation.

摘要

图分析如今在社区检测的诸多应用中被视为最先进的技术。数学中图的定义与计算机科学中将图作为一种抽象数据结构相结合,是基于图的方法在机器学习中取得成功的关键所在。基于图,已经开发出了多种方法,如最短路径优先(SPF)算法、子图提取、社交媒体分析、交通网络、生物信息学算法等。虽然SPF算法在优化问题中被广泛使用,但谱聚类(SC)算法在社区检测方面克服了大多数最先进方法的局限性。本文的目的是在新型冠状病毒Covid - 19国家数据集上引入一种基于图的社区检测方法。这项工作背后的动机是克服多类分类的局限性,由于SC是一种无监督聚类算法,无需在预处理步骤中预先定义输出聚类。我们提出的方法基于先前对输出聚类数量的自动估计所做的贡献。基于200多个国家的动态统计数据,每个聚类应将具有相似Covid - 19传播行为的国家归为一组。