• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

黄鳍鲷线粒体全基因组及鲷科系统发育分析

Complete mitochondrial genome of yellowback seabream, and phylogenetic analysis of the family Sparidae.

作者信息

Wu Ren-Xie, Zhai Yun, Niu Su-Fang, Liu Jing, Miao Ben-Ben, Liu Fang, Ou Chun-Xiao

机构信息

College of Fisheries, Guangdong Ocean University, Zhanjiang, P.R. China.

Laboratory of Marine Organism Taxonomy and Phylogeny, Institute of Oceanology, Chinese Academy of Sciences, Qingdao, P.R. China.

出版信息

Mitochondrial DNA B Resour. 2019 Jul 12;4(2):2441-2442. doi: 10.1080/23802359.2019.1637298.

DOI:10.1080/23802359.2019.1637298
PMID:33365577
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7687427/
Abstract

The complete mitogenome sequence of was amplified by designing 15 primer pairs. The circle genome was 16,618 bp in size and the overall base composition was 27.04% of A, 26.38% of T, 17.08% of G, and 29.50 of C, with significant anti-G bias. The complete mitogenome of encodes 37 canonical mitochondrial genes, two non-coding regions, an L-strand replication region (OL), and a control region (D-loop). The D-loop contained termination sequence domain (TAS), central conserved domains (CSB-F, CSB-E, CSB-D, CSB-C, and CSB-A), and conserved sequence blocks (CSB-1, CSB-2, and CSB-3). Phylogenetic analysis of nine sparid species well supported the phylogenetic position of and revealed the phylogenetic relationship of the family Sparidae at the level of mitochondrial genomes.

摘要

通过设计15对引物扩增出了[物种名称]的完整线粒体基因组序列。环状基因组大小为16,618 bp,总体碱基组成为:A占27.04%,T占26.38%,G占17.08%,C占29.50%,具有明显的抗G偏向性。[物种名称]的完整线粒体基因组编码37个典型的线粒体基因、两个非编码区、一个轻链复制区(OL)和一个控制区(D-loop)。D-loop包含终止序列结构域(TAS)、中央保守结构域(CSB-F、CSB-E、CSB-D、CSB-C和CSB-A)以及保守序列块(CSB-1、CSB-2和CSB-3)。对9种鲷科鱼类的系统发育分析很好地支持了[物种名称]的系统发育位置,并揭示了线粒体基因组水平上鲷科的系统发育关系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/60d2/7687427/831402a40872/TMDN_A_1637298_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/60d2/7687427/831402a40872/TMDN_A_1637298_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/60d2/7687427/831402a40872/TMDN_A_1637298_F0001_B.jpg

相似文献

1
Complete mitochondrial genome of yellowback seabream, and phylogenetic analysis of the family Sparidae.黄鳍鲷线粒体全基因组及鲷科系统发育分析
Mitochondrial DNA B Resour. 2019 Jul 12;4(2):2441-2442. doi: 10.1080/23802359.2019.1637298.
2
The second complete mitogenome of to dissect control region structure and phylogenetic problem of the superfamily Sparoidea (Teleostei, Perciformes).第二个完整的线粒体基因组,用于剖析鲷超科(硬骨鱼纲,鲈形目)的控制区结构和系统发育问题。
Mitochondrial DNA B Resour. 2019 Oct 7;4(2):3409-3411. doi: 10.1080/23802359.2019.1674708.
3
The complete mitochondrial genome of Sillago aeolus (Perciformes: Sillaginidae).长鳍银鲈(鲈形目:银鲈科)的完整线粒体基因组
Mitochondrial DNA A DNA Mapp Seq Anal. 2016;27(2):1499-500. doi: 10.3109/19401736.2014.953110. Epub 2014 Oct 20.
4
The complete mitochondrial genome of Pampus chinensis (Perciformes: Stromateidae).中国鲳(鲈形目:鲳科)的完整线粒体基因组
Mitochondrial DNA A DNA Mapp Seq Anal. 2016;27(1):601-2. doi: 10.3109/19401736.2014.908365. Epub 2014 Apr 14.
5
The complete mitochondrial genome of Pampus punctatissimus (Perciformes: Stromateidae).斑点马鲛(鲈形目:鲹科)的完整线粒体基因组
Mitochondrial DNA. 2015 Aug;26(4):649-50. doi: 10.3109/19401736.2013.836518. Epub 2013 Oct 3.
6
The complete mitochondrial genome of Pholis nebulosus (Perciformes: Pholidae).云斑锦鳚(鲈形目:锦鳚科)的完整线粒体基因组
Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Nov;27(6):4447-4448. doi: 10.3109/19401736.2015.1089564. Epub 2016 Mar 17.
7
The complete mitogenome of Pampus argenteus (Perciformes: Stromateidae).银鲳(鲈形目:鲳科)的完整线粒体基因组
Mitochondrial DNA A DNA Mapp Seq Anal. 2016;27(1):684-5. doi: 10.3109/19401736.2014.913142. Epub 2014 Apr 29.
8
The second complete mitogenome of (Perciformes, Nemipteridae) to analyze control region structure and intraspecific variation.用于分析控制区结构和种内变异的(鲈形目,金线鱼科)第二个完整线粒体基因组。
Mitochondrial DNA B Resour. 2019 Oct 11;4(2):3520-3522. doi: 10.1080/23802359.2019.1675546.
9
The complete mitochondrial genome of Pampus echinogaster (Perciformes: Stromateidae).棘头鲳(鲈形目:鲳科)的完整线粒体基因组
Mitochondrial DNA A DNA Mapp Seq Anal. 2016;27(1):289-90. doi: 10.3109/19401736.2014.892081. Epub 2014 Mar 11.
10
The complete mitochondrial genome of Sillago indica (Perciformes: Sillaginidae).印度银鲈(鲈形目:银鲈科)的完整线粒体基因组
Mitochondrial DNA A DNA Mapp Seq Anal. 2016;27(2):1445-6. doi: 10.3109/19401736.2014.953085. Epub 2014 Sep 18.

引用本文的文献

1
Mitochondrial Analysis of Sparidae Species to Detect a New DNA Barcoding Marker for to Utilize against Fraud.鲷科鱼类的线粒体分析,以检测一种新的用于打击欺诈行为的DNA条形码标记。
Foods. 2023 Sep 15;12(18):3441. doi: 10.3390/foods12183441.

本文引用的文献

1
Assessment of reproductive potential in multiple-spawning fish with indeterminate fecundity: a case study of yellow sea bream Dentex hypselosomus in the East China Sea.评估多产卵鱼类的生殖潜力:以东海黄姑鱼为例。
J Fish Biol. 2009 Jul;74(10):2338-54. doi: 10.1111/j.1095-8649.2009.02246.x.
2
MRBAYES: Bayesian inference of phylogenetic trees.MRBAYES:系统发育树的贝叶斯推断
Bioinformatics. 2001 Aug;17(8):754-5. doi: 10.1093/bioinformatics/17.8.754.
3
tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.
tRNAscan-SE:用于改进基因组序列中转运RNA基因检测的程序。
Nucleic Acids Res. 1997 Mar 1;25(5):955-64. doi: 10.1093/nar/25.5.955.