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沙门氏菌噬菌体vB_SalM_8-19(罗斯蒙特病毒属)的基因组分析。

Genome analysis of Salmonella phage vB_SalM_8-19 (genus Rosemountvirus).

作者信息

Cong Cong, Bing Dong Wei, Hui Jing Cui, Yu Yu Yuan, Yong Ping Xu, Li Li Wang, Shu Ying Li, Ji Bin Li, Mu Xu, Xiao Yu Li

机构信息

School of Bioengineering, Dalian University of Technology, Dalian, 116024, China.

Dalian SEM Bio-Engineering Technology Co. Ltd., Dalian, 116620, China.

出版信息

Arch Microbiol. 2021 May;203(4):1345-1356. doi: 10.1007/s00203-020-02121-5. Epub 2021 Jan 2.

Abstract

This work describes the characterization and genome annotation of Salmonella phage vB_SalM_8-19 (referred to as 8-19) isolated from sewage samples collected in a pig farm in Jilin, China. This phage was capable of infecting 60% Salmonella strains in our lab stock. The genome of phage 8-19 is composed of linear double-stranded DNA that is 52,648 bp in length with a G + C content of 46.02%; containing 74 ORFs and no tRNA genes. In October 2019, phylogenetic analyses indicated that phage 8-19 might belong to a novel cluster among the other similar phages which have not been specifically classified within some new genus in family Myoviridae. Recently, the International Committee on Taxonomy of Viruses (ICTV) defined phage 8-19 and its related phages as genus Rosemountvirus, family Myoviridae. This new genus, known as Rosemountvirus, is rarely reported in the literature.

摘要

本研究描述了从中国吉林某养猪场采集的污水样本中分离出的沙门氏菌噬菌体vB_SalM_8-19(简称8-19)的特性及基因组注释。该噬菌体能够感染我们实验室保藏菌株中的60%沙门氏菌菌株。噬菌体8-19的基因组由线性双链DNA组成,长度为52,648 bp,G+C含量为46.02%;包含74个开放阅读框,无tRNA基因。2019年10月的系统发育分析表明,噬菌体8-19可能属于肌尾噬菌体科一些新属中尚未明确分类的其他类似噬菌体中的一个新簇。最近,国际病毒分类委员会(ICTV)将噬菌体8-19及其相关噬菌体定义为罗斯蒙特病毒属,肌尾噬菌体科。这个名为罗斯蒙特病毒的新属在文献中鲜有报道。

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