Zhang Meng, Shen Lixin, Shi Jiajia, Chen Linxia, Luo Ying, Sun Jiquan, Fan Deliang, Hara Shintaro, Bao Zhihua
Ministry of Education Key Laboratory of Ecology and Resource Use of the Mongolian Plateau & Inner Mongolia Key Laboratory of Grassland Ecology, School of Ecology and Environment, Inner Mongolia University, Hohhot, 010021, China.
Graduate School of Life Sciences, Tohoku University, Sendai, Miyagi, 980-8577, Japan.
Curr Microbiol. 2021 Feb;78(2):789-795. doi: 10.1007/s00284-020-02296-6. Epub 2021 Jan 2.
A novel bacterial strain, designated MHJ-10J, was isolated from a soil sample obtained from a grassland in Inner Mongolia, China. MHJ-10J strain could grow at 4-37 °C (optimum: 30 °C) and pH 4-9 (optimum: pH 6), as well as in the presence of 0-6% NaCl (optimum: 1%). Cells of strain MHJ-10J are Gram-negative, rod-shaped, and motile. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain MHJ-10J was most closely related to Pseudomonas lutea OK2 (98.5% 16S rRNA gene sequence similarity). The values of the average nucleotide identities (ANI) and digital DNA-DNA hybridization (dDDH) between strain MHJ-10J and its related species were all below 80.5% and 24.4%, respectively, which are significantly lower than the thresholds of 95% for ANI and 70% for DDH for species delineation. The genomic G + C content of the MHJ-10J strain is 64.8 mol%. Based on the phenotypic, genotypic, chemotaxonomic, and phylogenetic analyses, strain MHJ-10J can be assigned to the genus Pseudomonas. In this study, we propose that strain MHJ-10J be classified as a novel species belonging to the genus Pseudomonas with the species name Pseudomonas pratensis sp. nov. The type strain of the proposed novel species is MHJ-10J (= KCTC 82206 = CGMCC 17322).
从中国内蒙古草原采集的土壤样本中分离出一株新型细菌菌株,命名为MHJ-10J。MHJ-10J菌株可在4-37°C(最适温度:30°C)和pH 4-9(最适pH:6)的条件下生长,也能在0-6% NaCl(最适浓度:1%)存在的环境中生长。MHJ-10J菌株的细胞为革兰氏阴性、杆状且具有运动性。基于16S rRNA基因序列的系统发育分析表明,MHJ-10J菌株与黄斑假单胞菌OK2关系最为密切(16S rRNA基因序列相似性为98.5%)。MHJ-10J菌株与其相关物种之间的平均核苷酸同一性(ANI)值和数字DNA-DNA杂交(dDDH)值分别均低于80.5%和24.4%,显著低于物种界定中ANI的95%阈值和DDH的70%阈值。MHJ-10J菌株的基因组G+C含量为64.8 mol%。基于表型、基因型、化学分类和系统发育分析,MHJ-10J菌株可归入假单胞菌属。在本研究中,我们建议将MHJ-10J菌株分类为假单胞菌属的一个新物种,命名为草原假单胞菌(Pseudomonas pratensis sp. nov.)。所提议新物种的模式菌株为MHJ-10J(=KCTC 82206 = CGMCC 17322)。