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小麦根际乳酸菌的比较基因组学及体外植物生长促进和生物防治特性

Comparative Genomics and In Vitro Plant Growth Promotion and Biocontrol Traits of Lactic Acid Bacteria from the Wheat Rhizosphere.

作者信息

Strafella Sabrina, Simpson David J, Yaghoubi Khanghahi Mohammad, De Angelis Maria, Gänzle Michael, Minervini Fabio, Crecchio Carmine

机构信息

Department of Soil, Plant and Food Sciences, University of Bari Aldo Moro, Via Amendola 165/a, 70126 Bari, Italy.

Department of Agricultural, Food and Nutritional Science, 410 Agriculture/Forestry Centre, University of Alberta, Edmonton, AB T6G 2P5, Canada.

出版信息

Microorganisms. 2020 Dec 30;9(1):78. doi: 10.3390/microorganisms9010078.

Abstract

This study aimed to isolate lactic acid bacteria (LAB) from wheat rhizosphere, to characterize their in vitro plant growth promoting activities and to differentiate plant-associated LAB from those associated with foods or human disease through comparative genomic analysis. subsp. and were isolated using de Man-Rogosa-Sharpe (MRS) and Glucose Yeast Peptone (GYP) as enrichment culture media. Comparative genomic analyses showed that plant-associated LAB strains were enriched in genes coding for bacteriocin production when compared to strains from other ecosystems. Isolates of and did not produce physiologically relevant concentrations of the phyto-hormone indolacetic acid. All isolates solubilized high amount of phosphate and 12 of 16 strains solubilized potassium. LB5, LB6, LB7, and LB9 inhibited the plant pathogenic to the same extent as two strains of sp. However, the antifungal activity of the abovementioned LAB strains depended on the medium of cultivation and a low pH while antifungal activity of spp. was independent of the growth medium and likely relates to antifungal lipopeptides. This study showed the potential of rhizospheric LAB for future application as biofertilizers in agriculture.

摘要

本研究旨在从小麦根际分离乳酸菌(LAB),表征其体外促进植物生长的活性,并通过比较基因组分析区分与植物相关的LAB与那些与食品或人类疾病相关的LAB。使用德氏乳杆菌-罗格斯-夏普(MRS)培养基和葡萄糖酵母蛋白胨(GYP)培养基分离出了[具体菌种名称未给出]亚种和[具体菌种名称未给出]。比较基因组分析表明,与来自其他生态系统的菌株相比,与植物相关的LAB菌株中编码细菌素产生的基因更为丰富。[具体菌种名称未给出]和[具体菌种名称未给出]的分离株未产生生理相关浓度的植物激素吲哚乙酸。所有分离株都能大量溶解磷酸盐,16株中有12株能溶解钾。LB5、LB6、LB7和LB9对植物病原菌[具体病原菌名称未给出]的抑制程度与两株[具体菌种名称未给出]菌株相同。然而,上述LAB菌株的抗真菌活性取决于培养介质和低pH值,而[具体菌种名称未给出]菌株的抗真菌活性与生长介质无关,可能与抗真菌脂肽有关。本研究表明了根际LAB作为未来农业生物肥料的应用潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0676/7823429/1a638880213f/microorganisms-09-00078-g001.jpg

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