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首个感染酒窖女王(某种微生物)的烈性噬菌体的特性分析

Characterization of the First Virulent Phage Infecting , the Queen of the Cellars.

作者信息

Philippe Cécile, Chaïb Amel, Jaomanjaka Fety, Claisse Olivier, Lucas Patrick M, Samot Johan, Cambillau Christian, Le Marrec Claire

机构信息

University of Bordeaux, ISVV, EA4577 Œnologie, Villenave d'Ornon, France.

INRA, ISVV, USC 1366 Oenologie, Villenave d'Ornon, France.

出版信息

Front Microbiol. 2021 Jan 13;11:596541. doi: 10.3389/fmicb.2020.596541. eCollection 2020.

Abstract

There has been little exploration of how phages contribute to the diversity of the bacterial community associated with winemaking and may impact fermentations and product quality. Prophages of , the most common species of lactic acid bacteria (LAB) associated with malolactic fermentation of wine, have been described, but no data is available regarding phages of with true virulent lifestyles. The current study reports on the incidence and characterization of the first group of virulent oenophages named Vinitor, isolated from the enological environment. Vinitor phages are morphologically very similar to siphoviruses infecting other LAB. Although widespread during winemaking, they are more abundant in musts than temperate oenophages. We obtained the complete genomic sequences of phages Vinitor162 and Vinitor27, isolated from white and red wines, respectively. The assembled genomes shared 97.6% nucleotide identity and belong to the same species. Coupled with phylogenetic analysis, our study revealed that the genomes of Vinitor phages are architecturally mosaics and represent unique combinations of modules amongst LAB infecting-phages. Our data also provide some clues to possible evolutionary connections between Vinitor and (pro)phages associated to epiphytic and insect-related bacteria.

摘要

关于噬菌体如何影响与酿酒相关的细菌群落多样性以及可能对发酵和产品质量产生何种影响,目前的研究还很少。已经对葡萄酒苹果酸-乳酸发酵中最常见的乳酸菌(LAB)物种的前噬菌体进行了描述,但关于具有真正烈性生活方式的噬菌体的数据仍然缺乏。本研究报告了从酿酒环境中分离出的第一组烈性葡萄酒噬菌体Vinitor的发生率和特征。Vinitor噬菌体在形态上与感染其他乳酸菌的长尾噬菌体非常相似。虽然它们在酿酒过程中广泛存在,但在葡萄汁中比温和型葡萄酒噬菌体更为丰富。我们分别从白葡萄酒和红葡萄酒中获得了噬菌体Vinitor162和Vinitor27的完整基因组序列。组装后的基因组具有97.6%的核苷酸同一性,属于同一物种。结合系统发育分析,我们的研究表明,Vinitor噬菌体的基因组在结构上是镶嵌的,代表了感染乳酸菌的噬菌体中独特的模块组合。我们的数据还为Vinitor与附生细菌和昆虫相关细菌的(前)噬菌体之间可能的进化联系提供了一些线索。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/44e1/7838156/c698b33ccc63/fmicb-11-596541-g001.jpg

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