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代谢组学和转录组学的整合揭示了导致放射性唾液腺功能障碍的趋同途径。

Integration of metabolomics and transcriptomics reveals convergent pathways driving radiation-induced salivary gland dysfunction.

机构信息

Department of Nutritional Sciences, University of Arizona, Tucson, Arizona.

Bioinformatics Shared Resource, Arizona Cancer Center, University of Arizona, Tucson, Arizona.

出版信息

Physiol Genomics. 2021 Mar 1;53(3):85-98. doi: 10.1152/physiolgenomics.00127.2020. Epub 2021 Feb 1.

DOI:10.1152/physiolgenomics.00127.2020
PMID:33522389
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7988743/
Abstract

Radiation therapy for head and neck cancer causes damage to the surrounding salivary glands, resulting in salivary gland hypofunction and xerostomia. Current treatments do not provide lasting restoration of salivary gland function following radiation; therefore, a new mechanistic understanding of the radiation-induced damage response is necessary for identifying therapeutic targets. The purpose of the present study was to investigate the metabolic phenotype of radiation-induced damage in parotid salivary glands by integrating transcriptomic and metabolomic data. Integrated data were then analyzed to identify significant gene-metabolite interactions. Mice received a single 5 Gy dose of targeted head and neck radiation. Parotid tissue samples were collected 5 days following treatment for RNA sequencing and metabolomics analysis. Altered metabolites and transcripts significantly converged on a specific region in the metabolic reaction network. Both integrative pathway enrichment using rank-based statistics and network analysis highlighted significantly coordinated changes in glutathione metabolism, energy metabolism (TCA cycle and thermogenesis), peroxisomal lipid metabolism, and bile acid production with radiation. Integrated changes observed in energy metabolism suggest that radiation induces a mitochondrial dysfunction phenotype. These findings validated previous pathways involved in the radiation-damage response, such as altered energy metabolism, and identified robust signatures in salivary glands, such as reduced glutathione metabolism, that may be driving salivary gland dysfunction.

摘要

头颈部癌症的放射治疗会对周围的唾液腺造成损伤,导致唾液腺功能低下和口干。目前的治疗方法并不能在放射治疗后持久地恢复唾液腺功能;因此,需要对辐射诱导损伤反应的机制有新的认识,以确定治疗靶点。本研究旨在通过整合转录组学和代谢组学数据,研究放射性损伤的唾液腺代谢表型。然后对整合数据进行分析,以确定显著的基因-代谢物相互作用。将小鼠接受单次 5Gy 的靶向头颈部放射治疗。在治疗后 5 天采集腮腺组织样本进行 RNA 测序和代谢组学分析。改变的代谢物和转录物显著汇聚在代谢反应网络的特定区域。基于排名的统计学和网络分析的综合途径富集均突出了谷胱甘肽代谢、能量代谢(TCA 循环和生热)、过氧化物酶体脂质代谢和胆汁酸生成与辐射的显著协调变化。观察到的能量代谢的综合变化表明,辐射诱导了一种线粒体功能障碍表型。这些发现验证了以前涉及放射损伤反应的途径,如能量代谢的改变,并确定了唾液腺中可能导致唾液腺功能障碍的特征性标志,如还原型谷胱甘肽代谢的减少。

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