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建立精准医学与个性化医疗综合生物样本库:东北医学大数据库项目

Establishment of Integrated Biobank for Precision Medicine and Personalized Healthcare: The Tohoku Medical Megabank Project.

作者信息

Fuse Nobuo, Sakurai-Yageta Mika, Katsuoka Fumiki, Danjoh Inaho, Shimizu Ritsuko, Tamiya Gen, Nagami Fuji, Kawame Hiroshi, Higuchi Shinichi, Kinoshita Kengo, Kure Shigeo, Yamamoto Masayuki

机构信息

Department of Integrative Genomics, Tohoku Medical Megabank Organization, Tohoku University, Sendai, Japan.

Department of Education and Training, Tohoku Medical Megabank Organization, Tohoku University, Sendai, Japan.

出版信息

JMA J. 2019 Sep 4;2(2):113-122. doi: 10.31662/jmaj.2019-0014. Epub 2019 Aug 6.

Abstract

The Tohoku Medical Megabank (TMM) project was established to provide creative reconstruction of the Tohoku area that suffered from a huge earthquake and ensuing tsunami (the Great East Japan Earthquake, GEJE). TMM aims to establish two large-scale genome cohorts and an integrated biobank managing biospecimen and related information. It supports community medicine by establishing next-generation medical systems through a combination of the prospective genome cohort studies with a total of 150,000 participants and genomic medicine. The strategies for genome analyses in TMM are to develop an elaborate genome reference panel by means of high-fidelity Japanese whole-genome sequence, to design custom single nucleotide polymorphism (SNP) arrays based on the reference panel, and to obtain genotype data for all the TMM cohort participants subsequently. Disease-associated genomic information and omics data, including metabolomics and microbiome analysis, provide an essential platform for precision medicine and personalized healthcare (PHC). Ethical, legal, and social issues (ELSI) and education are important for implementing genomic medicine. The major considerations of ELSI regarding each participant of the cohort studies are the respect for the autonomy and the protection of privacies. Moreover, developing and provide human resources not only for the TMM project but also for the social implementation of precision medicine and PHC is required. We started a pilot study of the return of genomic results for familial hypercholesterolemia (FH) as a target disease. TMM aims to establish solid platforms that support precision medicine and PHC based on the genomic and omics information and environmental and lifestyle factors of the individuals, which is one of the most advanced medical care beyond the evidenced-based medicine in the near future.

摘要

东北医学大数据中心(TMM)项目旨在对遭受巨大地震及随后海啸(东日本大地震)的东北地区进行创新性重建。TMM旨在建立两个大规模基因组队列以及一个管理生物样本和相关信息的综合生物样本库。它通过将总计15万名参与者的前瞻性基因组队列研究与基因组医学相结合来建立下一代医疗系统,从而支持社区医学。TMM中的基因组分析策略是通过高保真日本全基因组序列开发精细的基因组参考面板,基于该参考面板设计定制单核苷酸多态性(SNP)阵列,并随后获取所有TMM队列参与者的基因型数据。疾病相关的基因组信息和组学数据,包括代谢组学和微生物组分析,为精准医学和个性化医疗保健(PHC)提供了重要平台。伦理、法律和社会问题(ELSI)以及教育对于实施基因组医学很重要。ELSI对于队列研究的每个参与者的主要考量是尊重自主权和保护隐私。此外,不仅需要为TMM项目培养人力资源,还需要为精准医学和PHC的社会实施培养人力资源。我们启动了一项针对家族性高胆固醇血症(FH)这一目标疾病的基因组结果反馈的试点研究。TMM旨在基于个体的基因组和组学信息以及环境和生活方式因素建立支持精准医学和PHC的坚实平台,这是在不久的将来超越循证医学的最先进医疗保健之一。

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