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评价采用同步旋转晶体学结合湿空气和胶层涂布法进行室温微结晶学研究的数据收集策略。

Evaluation of the data-collection strategy for room-temperature micro-crystallography studied by serial synchrotron rotation crystallography combined with the humid air and glue-coating method.

机构信息

Protein Crystal Analysis Division, Japan Synchrotron Radiation Research Institute, 1-1-1 Kouto, Sayo-cho, Sayo-gun, Hyogo 679-5198, Japan.

Advanced Photon Technology Division, RIKEN SPring-8 Center, 1-1-1 Kouto, Sayo-cho, Sayo-gun, Hyogo 679-5148, Japan.

出版信息

Acta Crystallogr D Struct Biol. 2021 Mar 1;77(Pt 3):300-312. doi: 10.1107/S2059798321001686. Epub 2021 Feb 25.

DOI:10.1107/S2059798321001686
PMID:33645534
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7919407/
Abstract

Synchrotron serial crystallography (SSX) is an emerging data-collection method for micro-crystallography on synchrotron macromolecular (MX) crystallography beamlines. At SPring-8, the feasibility of the fixed-target approach was examined by collecting data using a 2D raster scan combined with goniometer rotation. Results at cryogenic temperatures demonstrated that rotation is effective for efficient data collection in SSX and the method was named serial synchrotron rotation crystallography (SS-ROX). To use this method for room-temperature (RT) data collection, a humid air and glue-coating (HAG) method was developed in which data were collected from polyvinyl alcohol-coated microcrystals fixed on a loop under humidity-controlled air. The performance and the RT data-collection strategy for micro-crystallography were evaluated using microcrystals of lysozyme. Although a change in unit-cell dimensions of up to 1% was observed during data collection, the impact on data quality was marginal. A comparison of data obtained at various absorbed doses revealed that absorbed doses of up to 210 kGy were tolerable in both global and local damage. Although this limits the number of photons deposited on each crystal, increasing the number of merged images improved the resolution. On the basis of these results, an equation was proposed that relates the achievable resolution to the total photon flux used to obtain a data set.

摘要

同步辐射单晶 X 射线衍射(SSX)是一种新兴的用于同步辐射大分子(MX)晶体学光束线的微晶体学数据采集方法。在 SPring-8,通过使用二维光栅扫描与测角仪旋转相结合的方式采集数据,检验了固定靶方法的可行性。低温条件下的结果表明,旋转对于 SSX 中高效的数据采集是有效的,该方法被命名为连续同步辐射旋转晶体学(SS-ROX)。为了在室温(RT)下使用该方法进行数据采集,开发了一种湿空气和胶涂层(HAG)方法,其中在湿度控制的空气中,从固定在循环上的聚乙烯醇涂层微晶体收集数据。使用溶菌酶的微晶体评估了该方法的性能和 RT 微晶体学数据采集策略。尽管在数据采集过程中观察到晶胞尺寸变化高达 1%,但对数据质量的影响微不足道。对不同吸收剂量下获得的数据进行比较表明,在全局和局部损伤方面,高达 210 kGy 的吸收剂量是可以耐受的。虽然这限制了沉积在每个晶体上的光子数量,但增加合并图像的数量可以提高分辨率。基于这些结果,提出了一个方程,将可实现的分辨率与获得数据集所使用的总光子通量联系起来。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/22ef/7919407/9cf8522f461f/d-77-00300-fig7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/22ef/7919407/c3941c311dd3/d-77-00300-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/22ef/7919407/bccd4bfb2f8a/d-77-00300-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/22ef/7919407/85492e0f76d1/d-77-00300-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/22ef/7919407/d0c5e866ff5c/d-77-00300-fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/22ef/7919407/334f77e9c7a1/d-77-00300-fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/22ef/7919407/181c389b8a34/d-77-00300-fig6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/22ef/7919407/9cf8522f461f/d-77-00300-fig7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/22ef/7919407/c3941c311dd3/d-77-00300-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/22ef/7919407/bccd4bfb2f8a/d-77-00300-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/22ef/7919407/85492e0f76d1/d-77-00300-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/22ef/7919407/d0c5e866ff5c/d-77-00300-fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/22ef/7919407/334f77e9c7a1/d-77-00300-fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/22ef/7919407/181c389b8a34/d-77-00300-fig6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/22ef/7919407/9cf8522f461f/d-77-00300-fig7.jpg

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