Institute of Edible Fungi, Shanghai Academy of Agricultural Sciences, National Engineering Research Center of Edible Fungi, Key Laboratory of Edible Fungi Resources and Utilization (South), Ministry of Agriculture, the People's Republic of China, No.1000, Jinqi Road, Shanghai, 201403, China.
BMC Genomics. 2021 Mar 6;22(1):160. doi: 10.1186/s12864-021-07480-x.
Hericium erinaceus, a rare edible and medicine fungus, is widely used in the food and medical field. Polysaccharides from H. erinaceus are the main bioactive compound that exert high bioactive value in the medical and healthcare industries.
The genome of H. erinaceus original strain HEA was reported 38.16 Mb, encoding 9780 predicted genes by single-molecule, real-time sequencing technology. The phylogenomic analysis showed that H. erinaceus had the closest evolutionary affinity with Dentipellis sp. The polysaccharide content in the fermented mycelia of mutated strains HEB and HEC, which obtained by ARTP mutagenesis in our previous study, was improved by 23.25 and 47.45%, and a new β-glucan fraction with molecular weight 1.056 × 10 Da was produced in HEC. Integrative analysis of transcriptome and proteomics showed the upregulation of the carbohydrate metabolism pathway modules in HEB and HEC might lead to the increased production of glucose-6P and promote the repeating units synthesis of polysaccharides. qPCR and PRM analysis confirmed that most of the co-enriched and differentially co-expressed genes involved in carbohydrate metabolism shared a similar expression trend with the transcriptome and proteome data in HEB and HEC. Heatmap analysis showed a noticeably decreased protein expression profile of the RAS-cAMP-PKA pathway in HEC with a highly increased 47.45% of polysaccharide content. The S phase progression blocking experiment further verified that the RAS-cAMP-PKA pathway's dysfunction might promote high polysaccharide and β-glucan production in the mutant strain HEC.
The study revealed the primary mechanism of the increased polysaccharide synthesis induced by ARTP mutagenesis and explored the essential genes and pathways of polysaccharide synthesis.
猴头菇是一种珍贵的药食两用真菌,广泛应用于食品和医药领域。猴头菇多糖是其发挥药用和保健功效的主要生物活性物质。
采用单分子实时测序技术,报道了猴头菇原始菌株 HEA 的基因组大小为 38.16 Mb,共预测到 9780 个基因。系统发育基因组学分析表明,猴头菇与 Dentipellis sp.亲缘关系最近。通过我们前期的 ARTP 诱变获得的突变株 HEB 和 HEC 的发酵菌丝体的多糖含量分别提高了 23.25%和 47.45%,且 HEC 中还产生了一种新的分子量为 1.056×10 Da 的β-葡聚糖。转录组和蛋白质组的综合分析表明,HEB 和 HEC 中碳水化合物代谢途径模块的上调可能导致葡萄糖-6P 的产生增加,并促进多糖重复单元的合成。qPCR 和 PRM 分析证实,大多数与碳水化合物代谢相关的共富集和差异共表达基因表达趋势与 HEB 和 HEC 中的转录组和蛋白质组数据相似。热图分析显示,HEC 中 RAS-cAMP-PKA 途径的蛋白质表达水平明显降低,而多糖含量却显著增加了 47.45%。S 期进展阻断实验进一步验证了 RAS-cAMP-PKA 途径功能障碍可能促进了突变株 HEC 中多糖和β-葡聚糖的大量合成。
本研究揭示了 ARTP 诱变诱导多糖合成增加的主要机制,并探讨了多糖合成的关键基因和途径。