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新种,一种从印度洋西北部深海热液羽流中分离出的新型氢和硫氧化化能自养菌。

sp. nov., a novel hydrogen- and sulfur-oxidizing chemolithoautotroph isolated from a deep-sea hydrothermal plume in the Northwestern Indian Ocean.

作者信息

Xie Shaobin, Wang Shasha, Li Dengfeng, Shao Zongze, Lai Qiliang, Wang Yejian, Wei Mingcong, Han Xiqiu, Jiang Lijing

机构信息

Fujian Key Laboratory of Marine Genetic Resources, Third Institute of Oceanography, Ministry of Natural Resources of PR China, Xiamen 361005, PR China.

Key Laboratory of Marine Genetic Resources, Third Institute of Oceanography, Ministry of Natural Resources of PR China, Xiamen 361005, PR China.

出版信息

Int J Syst Evol Microbiol. 2019 Jun;71(3). doi: 10.1099/ijsem.0.004748. Epub 2021 Mar 18.

Abstract

A novel mesophilic, hydrogen-, and sulfur-oxidizing bacterium, designated strain ST-419, was isolated from a deep-sea hydrothermal vent plume on the Carlsberg Ridge of the Northwestern Indian Ocean. The isolate was a Gram-staining-negative, non-motile and coccoid to oval-shaped bacterium. Growth was observed at 4-50 °C (optimum 37 °C), pH 5.0-8.6 (optimum pH 6.0) and 1.0-5.0 % (w/v) NaCl (optimum 3.0 %). ST-419 could grow chemlithoautotrophically with molecular hydrogen, sulfide, elemental sulfur and thiosulfate as energy sources. Molecular oxygen, nitrate and elemental sulfur could be used as electron acceptors. The predominant fatty acids were Cω7, Cω7 and C. The major polar lipids were phosphatidylethanolamine, diphosphatidylglycerol and phosphatidylglycerol. The respiratory quinone was menaquinone MK-6 and the G+C content of the genomic DNA was 42.4 mol%. Phylogenetic analysis based on 16S rRNA gene sequences revealed that ST-419 represented a member of genus and was most closely related to 1812E, with 97.6 % sequence similarity. The average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) values between ST-419 and 1812E were 74.6 and 19.6 %, respectively. The combined genotypic and phenotypic data indicate that ST-419 represents a novel species within the genus , for which the name sp. nov. is proposed. The type strain is ST-419 (=MCCC 1A17954=KCTC 25164).

摘要

从印度洋西北部卡尔斯伯格海岭的深海热液喷口羽流中分离出一种新型嗜温、氧化氢和氧化硫细菌,命名为ST-419菌株。该分离株为革兰氏染色阴性、不运动、球状至椭圆形细菌。在4-50°C(最适温度37°C)、pH 5.0-8.6(最适pH 6.0)和1.0-5.0%(w/v)NaCl(最适3.0%)条件下可观察到生长。ST-419可以以分子氢、硫化物、元素硫和硫代硫酸盐作为能源进行化能自养生长。分子氧、硝酸盐和元素硫可用作电子受体。主要脂肪酸为Cω7、Cω7和C。主要极性脂为磷脂酰乙醇胺、双磷脂酰甘油和磷脂酰甘油。呼吸醌为甲基萘醌MK-6,基因组DNA的G+C含量为42.4 mol%。基于16S rRNA基因序列的系统发育分析表明,ST-419代表属的一个成员,与1812E关系最密切,序列相似性为97.6%。ST-419与1812E之间的平均核苷酸同一性(ANI)和数字DNA-DNA杂交(dDDH)值分别为74.6%和19.6%。综合的基因型和表型数据表明,ST-419代表属内的一个新物种,为此提出新物种名sp. nov.。模式菌株为ST-419(=MCCC 1A17954=KCTC 25164)。

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