Peng Xuefeng, Valentine David L
Marine Science Institute, University of California, Santa Barbara, CA 93106, USA.
School of Earth, Ocean and Environment, University of South Carolina, Columbia, SC 29208, USA.
J Fungi (Basel). 2021 Mar 17;7(3):218. doi: 10.3390/jof7030218.
Fungi in terrestrial environments are known to play a key role in carbon and nitrogen biogeochemistry and exhibit high diversity. In contrast, the diversity and function of fungi in the ocean has remained underexplored and largely neglected. In the eastern tropical North Pacific oxygen minimum zone, we examined the fungal diversity by sequencing the internal transcribed spacer region 2 (ITS2) and mining a metagenome dataset collected from the same region. Additionally, we coupled N-tracer experiments with a selective inhibition method to determine the potential contribution of marine fungi to nitrous oxide (NO) production. Fungal communities evaluated by ITS2 sequencing were dominated by the phyla and at most depths. However, the metagenome dataset showed that about one third of the fungal community belong to early-diverging phyla. Fungal NO production rates peaked at the oxic-anoxic interface of the water column, and when integrated from the oxycline to the top of the anoxic depths, fungi accounted for 18-22% of total NO production. Our findings highlight the limitation of ITS-based methods typically used to investigate terrestrial fungal diversity and indicate that fungi may play an active role in marine nitrogen cycling.
已知陆地环境中的真菌在碳和氮生物地球化学中发挥关键作用,并具有高度多样性。相比之下,海洋中真菌的多样性和功能仍未得到充分探索且在很大程度上被忽视。在东热带北太平洋氧含量最小值区域,我们通过对内部转录间隔区2(ITS2)进行测序并挖掘从同一区域收集的宏基因组数据集,来研究真菌多样性。此外,我们将氮示踪实验与选择性抑制方法相结合,以确定海洋真菌对一氧化二氮(N₂O)产生的潜在贡献。通过ITS2测序评估的真菌群落,在大多数深度下以门 和 为主。然而,宏基因组数据集显示,约三分之一的真菌群落属于早期分化的门。真菌产生N₂O的速率在水柱的有氧-缺氧界面处达到峰值,并且当从氧跃层到缺氧深度顶部进行积分时,真菌占总N₂O产生量的18%-22%。我们的研究结果突出了通常用于研究陆地真菌多样性的基于ITS方法的局限性,并表明真菌可能在海洋氮循环中发挥积极作用。