Department of Pharmacognosy, College of Pharmacy, King Saud University, P.O. Box 2457, Riyadh 11451, Saudi Arabia.
Department of Pharmacognosy, Faculty of Pharmacy, Assiut University, Assiut 71526, Egypt.
Mar Drugs. 2021 Apr 25;19(5):243. doi: 10.3390/md19050243.
A strain, isolate MT25, was recovered from a sediment collected from the Challenger Deep of the Mariana Trench using a selective isolation procedure. The isolate produced two major metabolites, -acetylglutaminyl glutamine amide and desferrioxamine B, the chemical structures of which were determined using 1D and 2D-NMR, including H-N HSQC and H-N HMBC 2D-NMR, as well as high resolution MS. A whole genome sequence of the strain showed the presence of ten natural product-biosynthetic gene clusters, including one responsible for the biosynthesis of desferrioxamine B. Whilst 16S rRNA gene sequence analyses showed that the isolate was most closely related to the type strain of , a whole genome sequence analysis revealed it to be most closely related to 45142. The two strains were distinguished using a combination of genomic and phenotypic features. Based on these data, it is proposed that strain MT25 (NCIMB 15245, TISTR 2834) be classified as sp. nov. Analysis of the genome sequence of strain MT25 (genome size 6.1 Mbp) revealed genes predicted to responsible for its adaptation to extreme environmental conditions that prevail in deep-sea sediments.
一株名为 MT25 的菌株是使用选择性分离程序从马里亚纳海沟挑战者深渊沉积物中分离得到的。该分离株产生了两种主要代谢产物,-乙酰谷氨酰谷氨酰胺酰胺和去铁胺 B,其化学结构通过使用 1D 和 2D-NMR,包括 H-N HSQC 和 H-N HMBC 2D-NMR,以及高分辨率 MS 来确定。该菌株的全基因组序列显示存在十个天然产物生物合成基因簇,其中一个负责去铁胺 B 的生物合成。虽然 16S rRNA 基因序列分析表明该分离株与 的模式株最为密切相关,但全基因组序列分析表明它与 45142 最为密切相关。这两个菌株是通过基因组和表型特征的组合来区分的。基于这些数据,建议将菌株 MT25(NCIMB 15245,TISTR 2834)分类为 sp. nov. 对菌株 MT25(基因组大小 6.1 Mbp)的基因组序列分析表明,存在一些基因被预测负责其适应深海沉积物中普遍存在的极端环境条件。