Center for Computational Genetics and Genomics, Temple University, Philadelphia, PA, USA.
Department of Biological Sciences, California State University San Marcos, San Marcos, CA, USA.
Mol Biol Evol. 2021 Jul 29;38(8):3478-3485. doi: 10.1093/molbev/msab113.
The Pop-Gen Pipeline Platform (PPP) is a software platform for population genomic analyses. The PPP was designed as a collection of scripts that facilitate common population genomic workflows in a consistent and standardized Python environment. Functions were developed to encompass entire workflows, including input preparation, file format conversion, various population genomic analyses, and output generation. The platform has also been developed with reproducibility and extensibility of analyses in mind. The PPP is an open-source package that is available for download and use at https://ppp.readthedocs.io/en/latest/PPP_pages/install.html.
Pop-Gen 管道平台（PPP）是一个用于群体基因组分析的软件平台。PPP 被设计为一组脚本，这些脚本在一致且标准化的 Python 环境中促进常见的群体基因组工作流程。开发了功能来涵盖整个工作流程，包括输入准备、文件格式转换、各种群体基因组分析和输出生成。该平台还考虑了分析的可重复性和可扩展性。PPP 是一个开源软件包，可在 https://ppp.readthedocs.io/en/latest/PPP_pages/install.html 下载和使用。
