Laboratory of NMR Metabolomics, IBRAG, Department of Genetics, State University of Rio de Janeiro, Rio de Janeiro, 20551-030, Brazil.
Department of Cellular and Molecular Biology, IB, Federal Fluminense University, Niterói, 24210-200, Brazil.
Metabolomics. 2021 May 9;17(5):48. doi: 10.1007/s11306-021-01800-8.
In 1957, Francis Crick drew a linear diagram on a blackboard. This diagram is often called the "central dogma." Subsequently, the relationships between different steps of the "central dogma" have been shown to be considerably complex, mostly because of the emerging world of small molecules. It is noteworthy that metabolites can be generated from the diet through gut microbiome metabolism, serve as substrates for epigenetic modifications, destabilize DNA quadruplexes, and follow Lamarckian inheritance. Small molecules were once considered the missing link in the "central dogma"; however, recently they have acquired a central role, and their general perception as downstream products has become reductionist. Metabolomics is a large-scale analysis of metabolites, and this emerging field has been shown to be the closest omics associated with the phenotype and concomitantly, the basis for all omics.
Herein, we propose a broad updated perspective for the flux of information diagram centered in metabolomics, including the influence of other factors, such as epigenomics, diet, nutrition, and the gut- microbiome.
Metabolites are the beginning and the end of the flux of information.
1957 年,弗朗西斯·克里克(Francis Crick)在黑板上画了一个线性图。这个图通常被称为“中心法则”。随后,“中心法则”各个步骤之间的关系被证明相当复杂,主要是因为小分子的出现。值得注意的是,代谢物可以通过肠道微生物组代谢从饮食中产生,作为表观遗传修饰的底物,使 DNA 四链体不稳定,并遵循拉马克式遗传。小分子曾经被认为是“中心法则”中的缺失环节;然而,最近它们获得了核心地位,它们作为下游产物的普遍认知变得过于简化。代谢组学是对代谢物的大规模分析,这个新兴领域已被证明与表型最接近,并且是所有组学的基础。
本文提出了一个以代谢组学为中心的信息流通量的广泛更新视角,包括其他因素的影响,如表观基因组学、饮食、营养和肠道微生物组。
代谢物是信息流的起点和终点。